RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 EPB41L2O43491 1005 aaKnown RBP14.84□□□□□ -0.03
VCL-205ENST00000478896 MARCH6O60337 910 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 CDKL5O76039 1030 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 STBD1O95210 358 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 XBP1P17861 261 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 QARSP47897 775 aaKnown RBP14.84□□□□□ -0.03
VCL-205ENST00000478896 POLGP54098 1239 aaPredicted RBP14.84□□□□□ -0.03
VCL-205ENST00000478896 GIT2Q14161 759 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 NOMO2Q5JPE7 1267 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 RARS2Q5T160 578 aaKnown RBP14.84□□□□□ -0.03
VCL-205ENST00000478896 IER5LQ5T953 404 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 ANO5Q75V66 913 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 TMEM173Q86WV6 379 aaPredicted RBP14.84□□□□□ -0.03
VCL-205ENST00000478896 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
VCL-205ENST00000478896 URGCPQ8TCY9 931 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 AUTS2Q8WXX7 1259 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 PGBD4Q96DM1 585 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 CEP170P1Q96L14 293 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 RIPOR3Q96MK2 946 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 MBOAT7Q96N66 472 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 TRAIPQ9BWF2 469 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 ZBP1Q9H171 429 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 ADAM7Q9H2U9 754 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 CYP26B1Q9NR63 512 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 BMP2KQ9NSY1 1161 aaPredicted RBP14.84□□□□□ -0.03
VCL-205ENST00000478896 PDRG1Q9NUG6 133 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 TBC1D13Q9NVG8 400 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 KCNJ14Q9UNX9 436 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 COL4A3BPQ9Y5P4 624 aa14.84□□□□□ -0.03
VCL-205ENST00000478896 EML1O00423 815 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 WEE2P0C1S8 567 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 CTSAP10619 480 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 MTHFRP42898 656 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 PPP2R5CQ13362 524 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 MTMR3Q13615 1198 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 NPY5RQ15761 445 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 NEK8Q86SG6 692 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 DDX53Q86TM3 631 aaKnown RBP14.83□□□□□ -0.04
VCL-205ENST00000478896 ASIC4Q96FT7 647 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 IGSF21Q96ID5 467 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 NRDE2Q9H7Z3 1164 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 AGPAT5Q9NUQ2 364 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 DZANK1Q9NVP4 752 aa14.83□□□□□ -0.04
VCL-205ENST00000478896 DBR1Q9UK59 544 aaKnown RBP14.83□□□□□ -0.04
VCL-205ENST00000478896 ARID2Q68CP9 1835 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 MEIS3P2A8K0S8 358 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 C2CD4DB7Z1M9 353 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 CCNT1O60563 726 aaKnown RBP14.82□□□□□ -0.04
VCL-205ENST00000478896 GCFC2P16383 781 aaKnown RBP14.82□□□□□ -0.04
VCL-205ENST00000478896 VCPP55072 806 aaKnown RBP14.82□□□□□ -0.04
VCL-205ENST00000478896 NPEPPSP55786 919 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 PIK3AP1Q6ZUJ8 805 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 EXOC8Q8IYI6 725 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 TDRD5Q8NAT2 981 aaKnown RBP14.82□□□□□ -0.04
VCL-205ENST00000478896 KREMEN2Q8NCW0 462 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 PSPC1Q8WXF1 523 aaKnown RBP14.82□□□□□ -0.04
VCL-205ENST00000478896 FAM20AQ96MK3 541 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 FAM193BQ96PV7 902 aaPredicted RBP14.82□□□□□ -0.04
VCL-205ENST00000478896 LXNQ9BS40 222 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 PHF20Q9BVI0 1012 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 TM6SF1Q9BZW5 370 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 IFT122Q9HBG6 1241 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 DNAJB4Q9UDY4 337 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 SORCS3Q9UPU3 1222 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 PCDHB2Q9Y5E7 798 aa14.82□□□□□ -0.04
VCL-205ENST00000478896 OFD1O75665 1012 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 ERLIN2O94905 339 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 SSBP05455 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
VCL-205ENST00000478896 P4HBP07237 508 aaKnown RBP14.81□□□□□ -0.04
VCL-205ENST00000478896 GALTP07902 379 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 SRGAP2CP0DJJ0 459 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 EPCAMP16422 314 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 RFC5P40937 340 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 SCRN1Q12765 414 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 ATAT1Q5SQI0 421 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 NCAPH2Q6IBW4 605 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 KIAA1841Q6NSI8 718 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 SRGAP1Q7Z6B7 1085 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 CABP7Q86V35 215 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 C12orf76Q8N812 135 aaPredicted RBP14.81□□□□□ -0.04
VCL-205ENST00000478896 TMEM143Q96AN5 459 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 PHOX2BQ99453 314 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 NAP1L4Q99733 375 aaKnown RBP14.81□□□□□ -0.04
VCL-205ENST00000478896 RSAD1Q9HA92 442 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 KCNMB3Q9NPA1 279 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 VAV3Q9UKW4 847 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 PPME1Q9Y570 386 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 IRAK3Q9Y616 596 aa14.81□□□□□ -0.04
VCL-205ENST00000478896 GAS2O43903 313 aaKnown RBP14.8□□□□□ -0.04
VCL-205ENST00000478896 ZNF623O75123 536 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 AVPR2P30518 371 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 YWHABP31946 246 aaKnown RBP14.8□□□□□ -0.04
VCL-205ENST00000478896 SLC11A1P49279 550 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 TCF15Q12870 199 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 EMC2Q15006 297 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 PPP4R3AQ6IN85 833 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 OTUD6AQ7L8S5 288 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 PPFIBP1Q86W92 1011 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 UBALD2Q8IYN6 164 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms