RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 ZNF572Q7Z3I7 529 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CAGE1Q8TC20 777 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 INTS2Q9H0H0 1204 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KIAA1586Q9HCI6 787 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PDLIM7Q9NR12 457 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SEPT9Q9UHD8 586 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NAGPAQ9UK23 515 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 DNAJC12Q9UKB3 198 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KCNH4Q9UQ05 1017 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ZC3H4Q9UPT8 1303 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 LCTP09848 1927 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 A0A0A6YYK5 440 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 DENND3A2RUS2 1198 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 UNCXA6NJT0 531 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ZNF862O60290 1169 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 STBD1O95210 358 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 GARTP22102 1010 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CNGA1P29973 690 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PAFAH1B1P43034 410 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 APBA1Q02410 837 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CBWD6Q4V339 395 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CBWD3Q5JTY5 395 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CBWD5Q5RIA9 395 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CC2D1AQ6P1N0 951 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 WDR93Q6P2C0 686 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ALKBH5Q6P6C2 394 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ZNF571Q7Z3V5 609 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CCDC60Q8IWA6 550 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KRT222Q8N1A0 295 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 FAM81BQ96LP2 452 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ZNF302Q9NR11 478 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 AGTPBP1Q9UPW5 1226 aa13.56□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ADM5C9JUS6 153 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 OSBPP22059 807 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 GTF2H1P32780 548 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 EXOC8Q8IYI6 725 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 GTF3C2Q8WUA4 911 aaPredicted RBP13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CBWD1Q9BRT8 395 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ANKZF1Q9H8Y5 726 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MLXIPQ9HAP2 919 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 GPRC5CQ9NQ84 441 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 FAM53CQ9NYF3 392 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 BTBD7Q9P203 1132 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 HDAC6Q9UBN7 1215 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 EMSYQ7Z589 1322 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CES2O00748 559 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 EVI5O60447 810 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 OATP04181 439 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TRIM49P0CI25 452 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TRIM49CP0CI26 452 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 RFC5P40937 340 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MXI1P50539 228 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 POLGP54098 1239 aaPredicted RBP13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 DRAP1Q14919 205 aaPredicted RBP13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SNRNP35Q16560 246 aaKnown RBP13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MAP9Q49MG5 647 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CCDC181Q5TID7 509 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 FAM160B1Q5W0V3 765 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ARMC9Q7Z3E5 817 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NCAPG2Q86XI2 1143 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 FBXL18Q96ME1 805 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 OSBPL9Q96SU4 736 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NIFKQ9BYG3 293 aaKnown RBP13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PCIF1Q9H4Z3 704 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ELP3Q9H9T3 547 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NRBP2Q9NSY0 501 aa13.55□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MYH9P35579 1960 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TMEM150BA6NC51 233 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 H2AFZP0C0S5 128 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KLRC1P26715 233 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 EPC2Q52LR7 807 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 C9orf131Q5VYM1 1079 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KRT39Q6A163 491 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 H2AFVQ71UI9 128 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CYFIP1Q7L576 1253 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 LMO3Q8TAP4 145 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SLC7A3Q8WY07 619 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CDCA5Q96FF9 252 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 FAM167AQ96KS9 214 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SYT17Q9BSW7 474 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ASCC2Q9H1I8 757 aaPredicted RBP13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ZNF446Q9NWS9 450 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ARHGAP28Q9P2N2 729 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NENFQ9UMX5 172 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
TRAF3IP3-213ENST00000478359 STRN3Q13033 797 aa13.53□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KIF22Q14807 665 aa13.53□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CFAP221Q4G0U5 840 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms