RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 GIT2Q14161 759 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 LLGL1Q15334 1064 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 SNX30Q5VWJ9 437 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 ARHGAP27Q6ZUM4 889 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 H2AFVQ71UI9 128 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 PRUNE1Q86TP1 453 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 MYOCDQ8IZQ8 938 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 LNX1Q8TBB1 728 aaPredicted RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 ZNF384Q8TF68 577 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 AZIN2Q96A70 460 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 TRAPPC9Q96Q05 1148 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 VCXQ9H320 206 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 CDC42EP4Q9H3Q1 356 aaKnown RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 TXLNGQ9NUQ3 528 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 SCOCQ9UIL1 159 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 TTC7AQ9ULT0 858 aaPredicted RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 PHF24Q9UPV7 400 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 USP20Q9Y2K6 914 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 SUGT1Q9Y2Z0 365 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 DLEC1Q9Y238 1755 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 PVALEFA0A1B0GWK0 134 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 KRT36O76013 467 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 TJP3O95049 919 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 ZCCHC18P0CG32 403 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 IMPDH2P12268 514 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 CNPY1Q3B7I2 92 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 AGGF1Q8N302 714 aaeCLIP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 DTX3LQ8TDB6 740 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 LRRC8CQ8TDW0 803 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 GATA6Q92908 595 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 ARHGEF26Q96DR7 871 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 CALML4Q96GE6 196 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 PWWP2AQ96N64 755 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 TSG101Q99816 390 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 PAIP2Q9BPZ3 127 aaKnown RBP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 LNPEPQ9UIQ6 1025 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 LRCH1Q9Y2L9 728 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 FAM196BA6NMK8 535 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 GNA14O95837 355 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 FGRP09769 529 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 VCAM1P19320 739 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 STX2P32856 288 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 NEK3P51956 506 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 POLGP54098 1239 aaPredicted RBP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 CCDC15Q0P6D6 951 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 COASYQ13057 564 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 DNAJC3Q13217 504 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 TRIM28Q13263 835 aaKnown RBP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 RRP1BQ14684 758 aaKnown RBP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 RCN1Q15293 331 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 ZNF568Q3ZCX4 644 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 C10orf76Q5T2E6 689 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 INTS8Q75QN2 995 aaKnown RBP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 CADPS2Q86UW7 1296 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 NLRP10Q86W26 655 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 KRT35Q92764 455 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 PITPNM3Q9BZ71 974 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 ZWILCHQ9H900 591 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 GALNT8Q9NY28 637 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 CHORDC1Q9UHD1 332 aaPredicted RBP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 COG5Q9UP83 839 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL13A1-207ENST00000478219 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
COL13A1-207ENST00000478219 FAM187AA6NFU0 413 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 LAD1O00515 517 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 CREB3O43889 395 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 GOLGA8HP0CJ92 632 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 RARGP13631 454 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 SLC5A1P13866 664 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 PON1P27169 355 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 CHKAP35790 457 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 CCNFP41002 786 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 DRG2P55039 364 aaKnown RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 WDR4P57081 412 aaKnown RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 PPATQ06203 517 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 CTTNQ14247 550 aaKnown RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 TMEM63BQ5T3F8 832 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 APLFQ8IW19 511 aaPredicted RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 PTPRN2Q92932 1015 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 DNAJC19Q96DA6 116 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 NT5C3AQ9H0P0 336 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 MMADHCQ9H3L0 296 aaPredicted RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 RIC8AQ9NPQ8 531 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 CICQ96RK0 1608 aaPredicted RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 TBX10O75333 385 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 CHRNB2P17787 502 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 TPP2P29144 1249 aaPredicted RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 VHLP40337 213 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 ERFP50548 548 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 ACVR2BQ13705 512 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 ACSBG2Q5FVE4 666 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 C4orf50Q6ZRC1 276 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 PALB2Q86YC2 1186 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 CPNE8Q86YQ8 564 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 GLYCTKQ8IVS8 523 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms