RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 ATP2B1P20020 1258 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 AIMP1Q12904 312 aaKnown RBP7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 CR1LQ2VPA4 569 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 PARP10Q53GL7 1025 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 ZFYVE27Q5T4F4 411 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 CYP4F22Q6NT55 531 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 KIF6Q6ZMV9 814 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 DPH6Q7L8W6 267 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 NPM2Q86SE8 214 aaKnown RBP7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 ZNF34Q8IZ26 560 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 ARRDC4Q8NCT1 418 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 KIF1BPQ96EK5 621 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 MYD88Q99836 296 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 SHANK3Q9BYB0 1731 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 PALLDQ8WX93 1383 aa7.07□□□□□ -1.28
CDKN1B-204ENST00000477087 AOX1Q06278 1338 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 SALL3Q9BXA9 1300 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 PAPPAQ13219 1627 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 UBR2Q8IWV8 1755 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 PNMA6EA0A0J9YXQ4 647 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 EPB41L2O43491 1005 aaKnown RBP7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 KCNQ2O43526 872 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 PRICKLE3O43900 615 aaPredicted RBP7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 CNR2P34972 360 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 KIZQ2M2Z5 673 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 SKOR2Q2VWA4 1001 aaPredicted RBP7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 KRT27Q7Z3Y8 459 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 FERMT3Q86UX7 667 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 TRIM48Q8IWZ4 208 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 ZBTB38Q8NAP3 1195 aaPredicted RBP7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 DDX1Q92499 740 aaKnown RBP7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 ZNF669Q96BR6 464 aaPredicted RBP7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 ZFYVE21Q9BQ24 234 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 LRRCC1Q9C099 1032 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 LNPKQ9C0E8 428 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 GPR108Q9NPR9 543 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 PPARGC1AQ9UBK2 798 aaKnown RBP7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 ZBTB1Q9Y2K1 713 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 NUB1Q9Y5A7 615 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 GLI3P10071 1580 aa7.06□□□□□ -1.28
CDKN1B-204ENST00000477087 USP42Q9H9J4 1324 aaKnown RBP7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 PDPK1O15530 556 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 SURF6O75683 361 aaKnown RBP7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 CYP7B1O75881 506 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 GRK2P25098 689 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 GRK3P35626 688 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 CRKLP46109 303 aaKnown RBP7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 RFX5P48382 616 aaPredicted RBP7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 KIAA2012Q0VF49 1180 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 ITPK1Q13572 414 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 SLC10A5Q5PT55 438 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 PRAMEF18Q5VWM3 479 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 TEPPQ6URK8 271 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 KCNT2Q6UVM3 1135 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 LBX2Q6XYB7 198 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 IFNL3Q8IZI9 196 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 PIP4K2CQ8TBX8 421 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 SUCLG2Q96I99 432 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 ZSWIM3Q96MP5 696 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 CLIC6Q96NY7 704 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 WRNIP1Q96S55 665 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 SPATA9Q9BWV2 254 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 SLC6A20Q9NP91 592 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 ASH2LQ9UBL3 628 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 ZNF831Q5JPB2 1677 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 THSD7AQ9UPZ6 1657 aa7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 CICQ96RK0 1608 aaPredicted RBP7.05□□□□□ -1.28
CDKN1B-204ENST00000477087 KAT6BQ8WYB5 2073 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 CIAO1O76071 339 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 GNAT1P11488 350 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 GPR85P60893 370 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 SPIRE1Q08AE8 756 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 MTERF2Q49AM1 385 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 MCTP2Q6DN12 878 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 OSBP2Q969R2 916 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 IPO9Q96P70 1041 aaKnown RBP7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 TMEM209Q96SK2 561 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 CDC6Q99741 560 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 NARFQ9UHQ1 456 aa7.04□□□□□ -1.28
CDKN1B-204ENST00000477087 TTC41PQ6P2S7 1318 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 BLACEA4D250 179 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 DDX3XO00571 662 aaKnown RBP eCLIP7.03□□□□□ -1.282e-7■■■■□ 20.4
CDKN1B-204ENST00000477087 SLC27A2O14975 620 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 CAMTA2O94983 1202 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 IL15P40933 162 aaPredicted RBP7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 RGS3P49796 1198 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 PDE1AP54750 535 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 G3BP1Q13283 466 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 ADAM9Q13443 819 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 NTRK3Q16288 839 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 YOD1Q5VVQ6 348 aaPredicted RBP7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 STYK1Q6J9G0 422 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 OTOP3Q7RTS5 596 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 CLASRPQ8N2M8 674 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms