RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 TRIOO75962 3097 aa21.27■■□□□ 1
GMDS-204ENST00000476972 A0A087WZ62 844 aa21.27■■□□□ 1
GMDS-204ENST00000476972 CSDE1O75534 798 aaKnown RBP21.27■■□□□ 1
GMDS-204ENST00000476972 FGF18O76093 207 aa21.27■■□□□ 1
GMDS-204ENST00000476972 LYPLA2O95372 231 aa21.27■■□□□ 1
GMDS-204ENST00000476972 FGFR1P11362 822 aa21.27■■□□□ 1
GMDS-204ENST00000476972 RBM10P98175 930 aaKnown RBP21.27■■□□□ 1
GMDS-204ENST00000476972 CDC42EP1Q00587 391 aa21.27■■□□□ 1
GMDS-204ENST00000476972 EMC2Q15006 297 aa21.27■■□□□ 1
GMDS-204ENST00000476972 ZNF410Q86VK4 478 aa21.27■■□□□ 1
GMDS-204ENST00000476972 KSR1Q8IVT5 923 aa21.27■■□□□ 1
GMDS-204ENST00000476972 FBXL18Q96ME1 805 aa21.27■■□□□ 1
GMDS-204ENST00000476972 NLRP4Q96MN2 994 aa21.27■■□□□ 1
GMDS-204ENST00000476972 FDXACB1Q9BRP7 624 aaPredicted RBP21.27■■□□□ 1
GMDS-204ENST00000476972 GCOM2Q9BZD3 368 aaPredicted RBP21.27■■□□□ 1
GMDS-204ENST00000476972 TMEM161AQ9NX61 479 aa21.27■■□□□ 1
GMDS-204ENST00000476972 TECP42680 631 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 EXOC8Q8IYI6 725 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 THNSL1Q8IYQ7 743 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 EDAQ92838 391 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 TMEM143Q96AN5 459 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 MFSD14AQ96MC6 490 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 CWH43Q9H720 699 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 TLR9Q9NR96 1032 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 USP15Q9Y4E8 981 aaPredicted RBP21.26■□□□□ 0.99
GMDS-204ENST00000476972 COL4A3BPQ9Y5P4 624 aa21.26■□□□□ 0.99
GMDS-204ENST00000476972 ATG2AQ2TAZ0 1938 aa21.25■□□□□ 0.99
GMDS-204ENST00000476972 LOC730098B7Z3J9 87 aa21.25■□□□□ 0.99
GMDS-204ENST00000476972 GAS2O43903 313 aaKnown RBP21.25■□□□□ 0.99
GMDS-204ENST00000476972 TOB1P50616 345 aaPredicted RBP21.25■□□□□ 0.99
GMDS-204ENST00000476972 COLGALT1Q8NBJ5 622 aa21.25■□□□□ 0.99
GMDS-204ENST00000476972 VN1R2Q8NFZ6 395 aa21.25■□□□□ 0.99
GMDS-204ENST00000476972 PSPC1Q8WXF1 523 aaKnown RBP21.25■□□□□ 0.99
GMDS-204ENST00000476972 ELAC1Q9H777 363 aaKnown RBP21.25■□□□□ 0.99
GMDS-204ENST00000476972 ANKEF1Q9NU02 776 aa21.25■□□□□ 0.99
GMDS-204ENST00000476972 SMC3Q9UQE7 1217 aa21.25■□□□□ 0.99
GMDS-204ENST00000476972 SPATA31C1P0DKV0 1188 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 ZSCAN20P17040 1043 aaPredicted RBP21.24■□□□□ 0.99
GMDS-204ENST00000476972 MCTP1Q6DN14 999 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 C4orf32Q8N8J7 132 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 PIGOQ8TEQ8 1089 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 CCDC43Q96MW1 224 aaKnown RBP21.24■□□□□ 0.99
GMDS-204ENST00000476972 MTRQ99707 1265 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 KCNH6Q9H252 994 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 XPNPEP1Q9NQW7 623 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.24■□□□□ 0.99
GMDS-204ENST00000476972 PCDHB6Q9Y5E3 794 aa21.24■□□□□ 0.99
GMDS-204ENST00000476972 MED24O75448 989 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 SFPQP23246 707 aaKnown RBP eCLIP21.23■□□□□ 0.99
GMDS-204ENST00000476972 RARRES1P49788 294 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 NHLH1Q02575 133 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 LAMTOR4Q0VGL1 99 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 DUSP6Q16828 381 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 TCP11Q8WWU5 503 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 PRPF31Q8WWY3 499 aaKnown RBP21.23■□□□□ 0.99
GMDS-204ENST00000476972 CASD1Q96PB1 797 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 IFT122Q9HBG6 1241 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 TUFT1Q9NNX1 390 aa21.23■□□□□ 0.99
GMDS-204ENST00000476972 A0A087WWV3 80 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 H3BQV1 296 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 FSCN2O14926 492 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 LAG3P18627 525 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 CBX2Q14781 532 aaPredicted RBP21.22■□□□□ 0.99
GMDS-204ENST00000476972 PDE12Q6L8Q7 609 aaKnown RBP21.22■□□□□ 0.99
GMDS-204ENST00000476972 LRRC55Q6ZSA7 311 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 TRIM67Q6ZTA4 783 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 FERMT3Q86UX7 667 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 CATSPER3Q86XQ3 398 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 ECHDC2Q86YB7 292 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 ERMNQ8TAM6 284 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 RPGRIP1Q96KN7 1286 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 CDCA3Q99618 268 aaPredicted RBP21.22■□□□□ 0.99
GMDS-204ENST00000476972 POLR3CQ9BUI4 534 aaPredicted RBP21.22■□□□□ 0.99
GMDS-204ENST00000476972 PHF7Q9BWX1 381 aaPredicted RBP21.22■□□□□ 0.99
GMDS-204ENST00000476972 INO80BQ9C086 356 aaPredicted RBP21.22■□□□□ 0.99
GMDS-204ENST00000476972 TMEM117Q9H0C3 514 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 PUF60Q9UHX1 559 aaKnown RBP21.22■□□□□ 0.99
GMDS-204ENST00000476972 GTF3C3Q9Y5Q9 886 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 WDFY4Q6ZS81 3184 aa21.22■□□□□ 0.99
GMDS-204ENST00000476972 DGAT1O75907 488 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 SRGAP2CP0DJJ0 459 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 FXR2P51116 673 aaKnown RBP eCLIP21.21■□□□□ 0.99
GMDS-204ENST00000476972 PLCB3Q01970 1234 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 PTGDRQ13258 359 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 CUL4AQ13619 759 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 POTEGQ6S5H5 508 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 CATSPER4Q7RTX7 472 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 MRPS27Q92552 414 aaKnown RBP21.21■□□□□ 0.99
GMDS-204ENST00000476972 RNF19AQ9NV58 838 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 LZTS1Q9Y250 596 aa21.21■□□□□ 0.99
GMDS-204ENST00000476972 USO1O60763 962 aaKnown RBP21.2■□□□□ 0.98
GMDS-204ENST00000476972 RPA1P27694 616 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 MRE11P49959 708 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 ZXDAP98168 799 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 PLPP4Q5VZY2 271 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 KCNT2Q6UVM3 1135 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 BMP8AQ7Z5Y6 402 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 RNF149Q8NC42 400 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 SUSD6Q92537 303 aa21.2■□□□□ 0.98
GMDS-204ENST00000476972 PBXIP1Q96AQ6 731 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms