RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CCDC169A6NNP5 214 aa32.65■■■□□ 2.82
HOXB3-208ENST00000476342 FAM13AO94988 1023 aa32.65■■■□□ 2.82
HOXB3-208ENST00000476342 PLS3P13797 630 aa32.65■■■□□ 2.82
HOXB3-208ENST00000476342 CEP57L1Q8IYX8 460 aa32.65■■■□□ 2.82
HOXB3-208ENST00000476342 DDX12PQ92771 950 aa32.65■■■□□ 2.82
HOXB3-208ENST00000476342 TSPYL2Q9H2G4 693 aaPredicted RBP32.65■■■□□ 2.82
HOXB3-208ENST00000476342 LAMA3Q16787 3333 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP32.64■■■□□ 2.82
HOXB3-208ENST00000476342 SFI1A8K8P3 1242 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 ATP2A2P16615 1042 aaKnown RBP32.64■■■□□ 2.82
HOXB3-208ENST00000476342 SYKP43405 635 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 NPTX2P47972 431 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 MBTD1Q05BQ5 628 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 LRIT3Q3SXY7 679 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 DYMQ7RTS9 669 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 PARVGQ9HBI0 331 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 CHST12Q9NRB3 414 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 KBTBD4Q9NVX7 518 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 USP25Q9UHP3 1055 aa32.64■■■□□ 2.82
HOXB3-208ENST00000476342 MYMKA6NI61 221 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 ENPP3O14638 875 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 EFNA5P52803 228 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 SMTNP53814 917 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 NCBP1Q09161 790 aaKnown RBP32.63■■■□□ 2.81
HOXB3-208ENST00000476342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP32.63■■■□□ 2.81
HOXB3-208ENST00000476342 MYOCDQ8IZQ8 938 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 ADAM2Q99965 735 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 KMT5AQ9NQR1 393 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 C1orf112Q9NSG2 853 aa32.63■■■□□ 2.81
HOXB3-208ENST00000476342 PIN4Q9Y237 131 aaKnown RBP32.63■■■□□ 2.81
HOXB3-208ENST00000476342 PTPRSQ13332 1948 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 PHLPP2Q6ZVD8 1323 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 HSFX4A0A1B0GTS1 333 aaPredicted RBP32.62■■■□□ 2.81
HOXB3-208ENST00000476342 HSFX3A0A1B0GWH4 333 aaPredicted RBP32.62■■■□□ 2.81
HOXB3-208ENST00000476342 NDUFA8P51970 172 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 ZNF131P52739 623 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 DEFB103AP81534 67 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 SPIRE2Q8WWL2 714 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 LINC01599Q8WXQ3 324 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 PRIMPOLQ96LW4 560 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 RGS18Q9NS28 235 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 AGPAT5Q9NUQ2 364 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 PRMT7Q9NVM4 692 aaPredicted RBP32.62■■■□□ 2.81
HOXB3-208ENST00000476342 DACT1Q9NYF0 836 aa32.62■■■□□ 2.81
HOXB3-208ENST00000476342 MGEA5O60502 916 aa32.61■■■□□ 2.81
HOXB3-208ENST00000476342 MAPK6Q16659 721 aa32.61■■■□□ 2.81
HOXB3-208ENST00000476342 MYCT1Q8N699 235 aa32.61■■■□□ 2.81
HOXB3-208ENST00000476342 KIFC3Q9BVG8 833 aa32.61■■■□□ 2.81
HOXB3-208ENST00000476342 ZHX3Q9H4I2 956 aa32.61■■■□□ 2.81
HOXB3-208ENST00000476342 ADGRA3Q8IWK6 1321 aa32.61■■■□□ 2.81
HOXB3-208ENST00000476342 SLFN14P0C7P3 912 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 AXLP30530 894 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 DSC3Q14574 896 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 RTN4RL1Q86UN2 441 aaPredicted RBP32.6■■■□□ 2.81
HOXB3-208ENST00000476342 NTPCRQ9BSD7 190 aaKnown RBP32.6■■■□□ 2.81
HOXB3-208ENST00000476342 RNF216Q9NWF9 866 aaPredicted RBP32.6■■■□□ 2.81
HOXB3-208ENST00000476342 SERTAD1Q9UHV2 236 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 TTC3P53804 2025 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 LAMA2P24043 3122 aaKnown RBP32.6■■■□□ 2.81
HOXB3-208ENST00000476342 PPP4R3CPQ6ZMV5 832 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 SLC24A5Q71RS6 500 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 TMEM87AQ8NBN3 555 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 STAMQ92783 540 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 GOLPH3LQ9H4A5 285 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 ARHGAP28Q9P2N2 729 aa32.6■■■□□ 2.81
HOXB3-208ENST00000476342 H0YCG3 227 aa32.59■■■□□ 2.81
HOXB3-208ENST00000476342 FAM187BQ17R55 369 aa32.59■■■□□ 2.81
HOXB3-208ENST00000476342 HABP4Q5JVS0 413 aaKnown RBP32.59■■■□□ 2.81
HOXB3-208ENST00000476342 TWF2Q6IBS0 349 aaKnown RBP32.59■■■□□ 2.81
HOXB3-208ENST00000476342 TOP1MTQ969P6 601 aa32.59■■■□□ 2.81
HOXB3-208ENST00000476342 DNAJC19Q96DA6 116 aa32.59■■■□□ 2.81
HOXB3-208ENST00000476342 FZD8Q9H461 694 aa32.59■■■□□ 2.81
HOXB3-208ENST00000476342 K7ERI5 159 aa32.58■■■□□ 2.81
HOXB3-208ENST00000476342 ACTN4O43707 911 aaKnown RBP32.58■■■□□ 2.81
HOXB3-208ENST00000476342 TSPAN1O60635 241 aa32.58■■■□□ 2.81
HOXB3-208ENST00000476342 PRKCBP05771 671 aa32.58■■■□□ 2.81
HOXB3-208ENST00000476342 HERC6Q8IVU3 1022 aa32.58■■■□□ 2.81
HOXB3-208ENST00000476342 TRIM9Q9C026 710 aa32.58■■■□□ 2.81
HOXB3-208ENST00000476342 CCDC113Q9H0I3 377 aa32.58■■■□□ 2.81
HOXB3-208ENST00000476342 TMEM134Q9H6X4 195 aa32.58■■■□□ 2.81
HOXB3-208ENST00000476342 SLC16A4O15374 487 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 IDEP14735 1019 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 GAP43P17677 238 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 LIG1P18858 919 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 SCP2P22307 547 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 SARSP49591 514 aaKnown RBP32.57■■■□□ 2.8
HOXB3-208ENST00000476342 SMAD3P84022 425 aaKnown RBP32.57■■■□□ 2.8
HOXB3-208ENST00000476342 AMHR2Q16671 573 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 FAM109BQ6ICB4 259 aaPredicted RBP32.57■■■□□ 2.8
HOXB3-208ENST00000476342 NOTUMQ6P988 496 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 SLC17A8Q8NDX2 589 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 ZBED2Q9BTP6 218 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 SEL1LQ9UBV2 794 aa32.57■■■□□ 2.8
HOXB3-208ENST00000476342 C9IYK1 514 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 TRAK2O60296 914 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 GJB5O95377 273 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 STAG3L1P0CL83 205 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 NCKAP1LP55160 1127 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 LONRF3Q496Y0 759 aa32.56■■■□□ 2.8
HOXB3-208ENST00000476342 FAM178BQ8IXR5 827 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms