RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 MED4Q9NPJ6 270 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 SLC16A4O15374 487 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 H2AFZP0C0S5 128 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 SFNP31947 248 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 GTF2BQ00403 316 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 KRT76Q01546 638 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 ANGEL2Q5VTE6 544 aaKnown RBP17.35■□□□□ 0.37
VARS2-207ENST00000476162 SNRNP48Q6IEG0 339 aaKnown RBP17.35■□□□□ 0.37
VARS2-207ENST00000476162 PHLDB3Q6NSJ2 640 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 LRRC31Q6UY01 552 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 H2AFVQ71UI9 128 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 INTS8Q75QN2 995 aaKnown RBP17.35■□□□□ 0.37
VARS2-207ENST00000476162 VSIG10LQ86VR7 867 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 REPS2Q8NFH8 660 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 OLIG1Q8TAK6 271 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 LNX1Q8TBB1 728 aaPredicted RBP17.35■□□□□ 0.37
VARS2-207ENST00000476162 CCDC102AQ96A19 550 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 MTFR1LQ9H019 292 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 NR3C2P08235 984 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 VAMP7P51809 220 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 RNASE9P60153 205 aaKnown RBP17.35■□□□□ 0.37
VARS2-207ENST00000476162 ARHGAP44Q17R89 818 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 FAM102BQ5T8I3 360 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 GLYCTKQ8IVS8 523 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 ZSWIM2Q8NEG5 633 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 SLC30A5Q8TAD4 765 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 LMO3Q8TAP4 145 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 SELENOOQ9BVL4 669 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 VIPAS39Q9H9C1 493 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 SUFUQ9UMX1 484 aa17.35■□□□□ 0.37
VARS2-207ENST00000476162 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 CCND2P30279 289 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 BRCA1P38398 1863 aaKnown RBP17.34■□□□□ 0.37
VARS2-207ENST00000476162 PPP3CAQ08209 521 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 RPS6KA1Q15418 735 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 IFI16Q16666 785 aaKnown RBP17.34■□□□□ 0.37
VARS2-207ENST00000476162 NLRX1Q86UT6 975 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 C12orf56Q8IXR9 622 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 LRRC57Q8N9N7 239 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 TPCN2Q8NHX9 752 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 TMEM174Q8WUU8 243 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 INPP4AQ96PE3 977 aaPredicted RBP17.34■□□□□ 0.37
VARS2-207ENST00000476162 ACBD3Q9H3P7 528 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 HSPBP1Q9NZL4 362 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 HPCAL4Q9UM19 191 aa17.34■□□□□ 0.37
VARS2-207ENST00000476162 ANKRD65E5RJM6 399 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 DSG3P32926 999 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 PTPROQ16827 1216 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 C8orf74Q6P047 294 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 ANO5Q75V66 913 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 XXYLT1Q8NBI6 393 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 TIPINQ9BVW5 301 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 ST6GALNAC4Q9H4F1 302 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 ANKEF1Q9NU02 776 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 STIM2Q9P246 746 aa17.33■□□□□ 0.37
VARS2-207ENST00000476162 ZNF214Q9UL59 606 aaPredicted RBP17.33■□□□□ 0.37
VARS2-207ENST00000476162 ZNF541Q9H0D2 1346 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 LTBP3Q9NS15 1303 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 A0A087WUV0 522 aaPredicted RBP17.33■□□□□ 0.36
VARS2-207ENST00000476162 LRRN2O75325 713 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 GALCP54803 685 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 NCKAP1LP55160 1127 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 HSP90B2PQ58FF3 399 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 AENQ8WTP8 325 aaKnown RBP17.33■□□□□ 0.36
VARS2-207ENST00000476162 RUBCNQ92622 972 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 TAF4BQ92750 862 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 MOV10L1Q9BXT6 1211 aaKnown RBP17.33■□□□□ 0.36
VARS2-207ENST00000476162 INTUQ9ULD6 942 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 PCDHA10Q9Y5I2 948 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 ATP8B3O60423 1300 aa17.33■□□□□ 0.36
VARS2-207ENST00000476162 TMCO5BA8MYB1 307 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 FOXN3O00409 490 aaPredicted RBP17.32■□□□□ 0.36
VARS2-207ENST00000476162 KCNK3O14649 394 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 KIF4AO95239 1232 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 LMNB1P20700 586 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 MAP2K2P36507 400 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 GCLMP48507 274 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 TMEM132BQ14DG7 1078 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 C1orf220Q5T0J3 134 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 PLEKHO2Q8TD55 490 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 GPRASP2Q96D09 838 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 SYT11Q9BT88 431 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 ADAMTS5Q9UNA0 930 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 FAN1Q9Y2M0 1017 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 A0A0A6YYK5 440 aaPredicted RBP17.32■□□□□ 0.36
VARS2-207ENST00000476162 CCDC169A6NNP5 214 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 PHACTR2O75167 634 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 ZNF746Q6NUN9 644 aaPredicted RBP17.32■□□□□ 0.36
VARS2-207ENST00000476162 TRPM4Q8TD43 1214 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 C12orf42Q96LP6 360 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 KIFC3Q9BVG8 833 aa17.32■□□□□ 0.36
VARS2-207ENST00000476162 UBE2TQ9NPD8 197 aaPredicted RBP17.32■□□□□ 0.36
VARS2-207ENST00000476162 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
VARS2-207ENST00000476162 FAM170AA1A519 330 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 GOLGA8IPA6NC78 632 aa17.31■□□□□ 0.36
VARS2-207ENST00000476162 GOLGA8JA6NMD2 632 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms