RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 NOMO2Q5JPE7 1267 aa15.78■□□□□ 0.12
FAM3A-218ENST00000475657 EFCAB12Q6NXP0 572 aa15.78■□□□□ 0.12
FAM3A-218ENST00000475657 CMTR1Q8N1G2 835 aaKnown RBP15.78■□□□□ 0.12
FAM3A-218ENST00000475657 ZBTB44Q8NCP5 570 aa15.78■□□□□ 0.12
FAM3A-218ENST00000475657 MAP4K1Q92918 833 aa15.78■□□□□ 0.12
FAM3A-218ENST00000475657 MYADMQ96S97 322 aa15.78■□□□□ 0.12
FAM3A-218ENST00000475657 LY9Q9HBG7 655 aa15.78■□□□□ 0.12
FAM3A-218ENST00000475657 MRPL17Q9NRX2 175 aaKnown RBP15.78■□□□□ 0.12
FAM3A-218ENST00000475657 C2orf16Q68DN1 1984 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 PLEKHA8P1O95397 391 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 LAMP2P13473 410 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 RXRAP19793 462 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 GPC3P51654 580 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 MB21D2Q8IYB1 491 aaPredicted RBP15.77■□□□□ 0.12
FAM3A-218ENST00000475657 TMTC2Q8N394 836 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 HDAC7Q8WUI4 952 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 ATRIPQ8WXE1 791 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 NELL1Q92832 810 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 FAM167AQ96KS9 214 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 BCO2Q9BYV7 579 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 OSBPL6Q9BZF3 934 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 EPC1Q9H2F5 836 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 MAN1C1Q9NR34 630 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 SSX2IPQ9Y2D8 614 aa15.77■□□□□ 0.12
FAM3A-218ENST00000475657 DOCK8Q8NF50 2099 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 hCG_1642624A0A1W2PR95 340 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 DDX39AO00148 427 aaKnown RBP15.76■□□□□ 0.11
FAM3A-218ENST00000475657 LAMTOR5O43504 91 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 LILRB5O75023 590 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 ZNF623O75123 536 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 TGM1P22735 817 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 SREBF1P36956 1147 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 MAGEA9P43362 315 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 SLC11A1P49279 550 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 CDC42EP1Q00587 391 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 RNASELQ05823 741 aaKnown RBP15.76■□□□□ 0.11
FAM3A-218ENST00000475657 HTR4Q13639 388 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 ZNF746Q6NUN9 644 aaPredicted RBP15.76■□□□□ 0.11
FAM3A-218ENST00000475657 CASC1Q6TDU7 716 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 SMAP1Q8IYB5 467 aaPredicted RBP15.76■□□□□ 0.11
FAM3A-218ENST00000475657 DDX23Q9BUQ8 820 aaKnown RBP15.76■□□□□ 0.11
FAM3A-218ENST00000475657 FOXQ1Q9C009 403 aa15.76■□□□□ 0.11
FAM3A-218ENST00000475657 ZFP37Q9Y6Q3 630 aaPredicted RBP15.76■□□□□ 0.11
FAM3A-218ENST00000475657 KANSL1LA0AUZ9 987 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 DCDC2BA2VCK2 349 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 IPO5O00410 1097 aaKnown RBP15.75■□□□□ 0.11
FAM3A-218ENST00000475657 INPPL1O15357 1258 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 PRC1O43663 620 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 TBC1D4O60343 1298 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 OFD1O75665 1012 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 ADH1AP07327 375 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 CALM1P0DP23 149 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 CALM2P0DP24 149 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 CALM3P0DP25 149 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 NFXL1Q6ZNB6 911 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 CCDC82Q8N4S0 544 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 SMG7Q92540 1137 aaKnown RBP15.75■□□□□ 0.11
FAM3A-218ENST00000475657 RPS6KC1Q96S38 1066 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 LRRC2Q9BYS8 371 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 ANO3Q9BYT9 981 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 RIC8AQ9NPQ8 531 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 TBC1D22BQ9NU19 505 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 SPATA6Q9NWH7 488 aaPredicted RBP15.75■□□□□ 0.11
FAM3A-218ENST00000475657 ZSCAN32Q9NX65 697 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 DNAJB4Q9UDY4 337 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 SMG5Q9UPR3 1016 aaKnown RBP15.75■□□□□ 0.11
FAM3A-218ENST00000475657 PCDHA10Q9Y5I2 948 aa15.75■□□□□ 0.11
FAM3A-218ENST00000475657 GLUD1P00367 558 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 ALDH2P05091 517 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 PSAPP07602 524 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 ZNF76P36508 570 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 PRKCQQ04759 706 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 AP3B2Q13367 1082 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 HEATR3Q7Z4Q2 680 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 LRRC71Q8N4P6 559 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 ZNF707Q96C28 371 aaPredicted RBP15.74■□□□□ 0.11
FAM3A-218ENST00000475657 TMEM175Q9BSA9 504 aa15.74■□□□□ 0.11
FAM3A-218ENST00000475657 GCOM2Q9BZD3 368 aaPredicted RBP15.74■□□□□ 0.11
FAM3A-218ENST00000475657 FAM86B1E9PN63 330 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 LRRN2O75325 713 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 SOD2P04179 222 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 URODP06132 367 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 FAM86B2P0C5J1 330 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 FGFR4P22455 802 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 RAB27AP51159 221 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 CSTF1Q05048 431 aaKnown RBP15.73■□□□□ 0.11
FAM3A-218ENST00000475657 PPP1R18Q6NYC8 613 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 RSPO2Q6UXX9 243 aaPredicted RBP15.73■□□□□ 0.11
FAM3A-218ENST00000475657 PLA2G4DQ86XP0 818 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 ZNF280BQ86YH2 543 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 NLRP7Q8WX94 980 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 LPPQ93052 612 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 CHAMP1Q96JM3 812 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 SCLT1Q96NL6 688 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 FAM126AQ9BYI3 521 aaPredicted RBP15.73■□□□□ 0.11
FAM3A-218ENST00000475657 LSG1Q9H089 658 aaKnown RBP15.73■□□□□ 0.11
FAM3A-218ENST00000475657 GLT8D2Q9H1C3 349 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 PLEKHA4Q9H4M7 779 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 RXFP1Q9HBX9 757 aa15.73■□□□□ 0.11
FAM3A-218ENST00000475657 NRBP2Q9NSY0 501 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms