RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 ACACBO00763 2458 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 MEIS3P2A8K0S8 358 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 LMNAP02545 664 aaKnown RBP17.92■□□□□ 0.46
ITGB1-211ENST00000475184 SFPQP23246 707 aaKnown RBP eCLIP17.92■□□□□ 0.46
ITGB1-211ENST00000475184 KLRC2P26717 231 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 SLC11A1P49279 550 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 UGCGQ16739 394 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 PFKFB3Q16875 520 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-211ENST00000475184 TCEANC2Q96MN5 208 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 ZMYND12Q9H0C1 365 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 GBP3Q9H0R5 595 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 SEMA4AQ9H3S1 761 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 FAM217BQ9NTX9 383 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-211ENST00000475184 STK39Q9UEW8 545 aa17.92■□□□□ 0.46
ITGB1-211ENST00000475184 PIN4Q9Y237 131 aaKnown RBP17.92■□□□□ 0.46
ITGB1-211ENST00000475184 TDRD15B5MCY1 1934 aaKnown RBP17.92■□□□□ 0.46
ITGB1-211ENST00000475184 STK25O00506 426 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 NARSO43776 548 aaKnown RBP17.91■□□□□ 0.46
ITGB1-211ENST00000475184 B4GALT3O60512 393 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 CNPP09543 421 aaKnown RBP17.91■□□□□ 0.46
ITGB1-211ENST00000475184 CDC27P30260 824 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 CIITAP33076 1130 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 RAB27AP51159 221 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 CDC42EP1Q00587 391 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 TARBP2Q15633 366 aaKnown RBP17.91■□□□□ 0.46
ITGB1-211ENST00000475184 RMDN1Q96DB5 314 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 KLHL5Q96PQ7 755 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 ESYT1Q9BSJ8 1104 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 C6orf50Q9HD87 102 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 ANO2Q9NQ90 1003 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 FAM105AQ9NUU6 356 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 WNT16Q9UBV4 365 aa17.91■□□□□ 0.46
ITGB1-211ENST00000475184 A0A087WZ62 844 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 CHMP2AO43633 222 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 N4BP1O75113 896 aaKnown RBP17.9■□□□□ 0.46
ITGB1-211ENST00000475184 OFD1O75665 1012 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 SSBP05455 408 aaKnown RBP eCLIP17.9■□□□□ 0.46
ITGB1-211ENST00000475184 CFHP08603 1231 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 RFX1P22670 979 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 SFNP31947 248 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 EXOSC10Q01780 885 aaKnown RBP17.9■□□□□ 0.46
ITGB1-211ENST00000475184 ZNF280BQ86YH2 543 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 CCDC12Q8WUD4 166 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-211ENST00000475184 FDXACB1Q9BRP7 624 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-211ENST00000475184 SEPT9Q9UHD8 586 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-211ENST00000475184 MYH15Q9Y2K3 1946 aa17.9■□□□□ 0.46
ITGB1-211ENST00000475184 MED19A0JLT2 244 aaPredicted RBP17.89■□□□□ 0.45
ITGB1-211ENST00000475184 KRBA1A5PL33 1030 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 MSH4O15457 936 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 GAS7O60861 476 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 LILRB3O75022 631 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 ZNF623O75123 536 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 DNM2P50570 870 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 JAK3P52333 1124 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 RCAN1P53805 252 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 NONOQ15233 471 aaKnown RBP eCLIP17.89■□□□□ 0.451e-8■■■□□ 16.8
ITGB1-211ENST00000475184 MTERF2Q49AM1 385 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 RNF20Q5VTR2 975 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 DHX32Q7L7V1 743 aaKnown RBP17.89■□□□□ 0.45
ITGB1-211ENST00000475184 ZNF410Q86VK4 478 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 CMASQ8NFW8 434 aaPredicted RBP17.89■□□□□ 0.45
ITGB1-211ENST00000475184 URGCPQ8TCY9 931 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 RSAD2Q8WXG1 361 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 RIT2Q99578 217 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 INO80BQ9C086 356 aaPredicted RBP17.89■□□□□ 0.45
ITGB1-211ENST00000475184 MAN1C1Q9NR34 630 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 MRPL17Q9NRX2 175 aaKnown RBP17.89■□□□□ 0.45
ITGB1-211ENST00000475184 R4GN57 208 aa17.89■□□□□ 0.45
ITGB1-211ENST00000475184 GNA11P29992 359 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 GBP2P32456 591 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-211ENST00000475184 CATSPER4Q7RTX7 472 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 DGLUCYQ7Z3D6 616 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 RHPN2Q8IUC4 686 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 KIAA2013Q8IYS2 634 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 STAMQ92783 540 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 NIFKQ9BYG3 293 aaKnown RBP17.88■□□□□ 0.45
ITGB1-211ENST00000475184 UNC45AQ9H3U1 944 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 TBC1D17Q9HA65 648 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 NAP1L2Q9ULW6 460 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-211ENST00000475184 CA14Q9ULX7 337 aa17.88■□□□□ 0.45
ITGB1-211ENST00000475184 IGKV6-21A0A0C4DH24 114 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 TMEM150BA6NC51 233 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 DDHD2O94830 711 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 ADD1P35611 737 aaKnown RBP17.87■□□□□ 0.45
ITGB1-211ENST00000475184 XKR3Q5GH77 459 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 LRCH2Q5VUJ6 765 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 RIN2Q8WYP3 895 aaPredicted RBP17.87■□□□□ 0.45
ITGB1-211ENST00000475184 SLC5A5Q92911 643 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 CEP89Q96ST8 783 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 TEKT3Q9BXF9 490 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 WDR6Q9NNW5 1121 aaKnown RBP17.87■□□□□ 0.45
ITGB1-211ENST00000475184 SUCLA2Q9P2R7 463 aaPredicted RBP17.87■□□□□ 0.45
ITGB1-211ENST00000475184 PCDHB2Q9Y5E7 798 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 CLUHO75153 1309 aa17.87■□□□□ 0.45
ITGB1-211ENST00000475184 KMT2BQ9UMN6 2715 aaPredicted RBP17.86■□□□□ 0.45
ITGB1-211ENST00000475184 CCDC196A0A1B0GTZ2 297 aa17.86■□□□□ 0.45
ITGB1-211ENST00000475184 CCDC195A0A1B0GUA6 201 aa17.86■□□□□ 0.45
ITGB1-211ENST00000475184 C2CD2LO14523 706 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms