RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PRIMPOLQ96LW4 560 aa18.74■□□□□ 0.59
SCAF11-206ENST00000474828 IPO9Q96P70 1041 aaKnown RBP18.74■□□□□ 0.59
SCAF11-206ENST00000474828 C2orf40Q9H1Z8 148 aa18.74■□□□□ 0.59
SCAF11-206ENST00000474828 C1orf112Q9NSG2 853 aa18.74■□□□□ 0.59
SCAF11-206ENST00000474828 ARHGAP28Q9P2N2 729 aa18.74■□□□□ 0.59
SCAF11-206ENST00000474828 KCNG1Q9UIX4 513 aa18.74■□□□□ 0.59
SCAF11-206ENST00000474828 TTC3P53804 2025 aa18.74■□□□□ 0.59
SCAF11-206ENST00000474828 ADGRA3Q8IWK6 1321 aa18.74■□□□□ 0.59
SCAF11-206ENST00000474828 ZBBXA8MT70 800 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 CSDE1O75534 798 aaKnown RBP18.73■□□□□ 0.59
SCAF11-206ENST00000474828 SCP2P22307 547 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 AXLP30530 894 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 NPTX2P47972 431 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 EFNA5P52803 228 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 SLC24A5Q71RS6 500 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 MAEAQ7L5Y9 396 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 GPBP1Q86WP2 473 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 IQUBQ8NA54 791 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 SP7Q8TDD2 431 aaPredicted RBP18.73■□□□□ 0.59
SCAF11-206ENST00000474828 DNAJC19Q96DA6 116 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 LRCH3Q96II8 777 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 ADAM2Q99965 735 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 REEP2Q9BRK0 252 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 PYM1Q9BRP8 204 aaKnown RBP18.73■□□□□ 0.59
SCAF11-206ENST00000474828 TNMDQ9H2S6 317 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 ELAC1Q9H777 363 aaKnown RBP18.73■□□□□ 0.59
SCAF11-206ENST00000474828 MAGEF1Q9HAY2 307 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 PCDHA11Q9Y5I1 949 aa18.73■□□□□ 0.59
SCAF11-206ENST00000474828 TCHHQ07283 1943 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 TMEM265A0A087WTH1 108 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 A0A0U1RQF3 1178 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 FRMD3A2A2Y4 597 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 TSPAN1O60635 241 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 ZNF623O75123 536 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 PLS3P13797 630 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 STAT6P42226 847 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 SARSP49591 514 aaKnown RBP18.72■□□□□ 0.59
SCAF11-206ENST00000474828 CLEC17AQ6ZS10 378 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 SV2BQ7L1I2 683 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 ZNF598Q86UK7 904 aaKnown RBP18.72■□□□□ 0.59
SCAF11-206ENST00000474828 RASSF8Q8NHQ8 419 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 CCDC51Q96ER9 411 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 IFT74Q96LB3 600 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 SCLT1Q96NL6 688 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 FIZ1Q96SL8 496 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 PBX4Q9BYU1 374 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 TMEM134Q9H6X4 195 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 FAM13BQ9NYF5 915 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 KCNH3Q9ULD8 1083 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 PHLPP2Q6ZVD8 1323 aa18.72■□□□□ 0.59
SCAF11-206ENST00000474828 MYMKA6NI61 221 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 GRXCR1A8MXD5 290 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 NCLP19338 710 aaKnown RBP18.71■□□□□ 0.59
SCAF11-206ENST00000474828 FGFR4P22455 802 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 RAB30Q15771 203 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 CATSPER4Q7RTX7 472 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 NPAS4Q8IUM7 802 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 TMEM87AQ8NBN3 555 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 ZNF689Q96CS4 500 aaPredicted RBP18.71■□□□□ 0.59
SCAF11-206ENST00000474828 RAD9AQ99638 391 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 ST6GALNAC4Q9H4F1 302 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 PRMT7Q9NVM4 692 aaPredicted RBP18.71■□□□□ 0.59
SCAF11-206ENST00000474828 DACT1Q9NYF0 836 aa18.71■□□□□ 0.59
SCAF11-206ENST00000474828 CHD7Q9P2D1 2997 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 NPHP3-ACAD11A0A0J9YXS1 232 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 A0A1B0GUA9 196 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 LRRIQ4A6NIV6 560 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 SSBP05455 408 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCAF11-206ENST00000474828 NCKAP1LP55160 1127 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 PDILTQ8N807 584 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 TMEM161BQ8NDZ6 487 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 DDX12PQ92771 950 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 PANK2Q9BZ23 570 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 POLD4Q9HCU8 107 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 TMEM161AQ9NX61 479 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 LARSQ9P2J5 1176 aaKnown RBP18.7■□□□□ 0.58
SCAF11-206ENST00000474828 USP25Q9UHP3 1055 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 CNTNAP2Q9UHC6 1331 aa18.7■□□□□ 0.58
SCAF11-206ENST00000474828 INO80B-WBP1J3KQ70 363 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 ACKR2O00590 384 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 POLR2DO15514 142 aaKnown RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 ACTN4O43707 911 aaKnown RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 DGKIO75912 1065 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 EOMESO95936 686 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 SLFN14P0C7P3 912 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 MAPTP10636 758 aaKnown RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 PFKFB1P16118 471 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 ZSCAN20P17040 1043 aaPredicted RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 ATF7P17544 494 aaPredicted RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 PEX3P56589 373 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 DMP1Q13316 513 aaPredicted RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 TAS1R3Q7RTX0 852 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 MRPL10Q7Z7H8 261 aaKnown RBP18.69■□□□□ 0.58
SCAF11-206ENST00000474828 ZBTB8OSQ8IWT0 167 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 RSPH1Q8WYR4 309 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 STRA6Q9BX79 667 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 LRRC27Q9C0I9 530 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 PARVGQ9HBI0 331 aa18.69■□□□□ 0.58
SCAF11-206ENST00000474828 GDPD2Q9HCC8 539 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms