RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RAB27AP51159 221 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 NPEPPSP55786 919 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 ZP2Q05996 745 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 NCBP1Q09161 790 aaKnown RBP16.87■□□□□ 0.29
VARS-223ENST00000474643 EPHA7Q15375 998 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 LONRF3Q496Y0 759 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 XKR9Q5GH70 373 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 B3GNT9Q6UX72 402 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 MRPS27Q92552 414 aaKnown RBP16.87■□□□□ 0.29
VARS-223ENST00000474643 LRFN3Q9BTN0 628 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 ZSWIM4Q9H7M6 989 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 NGRNQ9NPE2 291 aaKnown RBP16.87■□□□□ 0.29
VARS-223ENST00000474643 RAPGEFL1Q9UHV5 662 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 BARX2Q9UMQ3 279 aaPredicted RBP16.87■□□□□ 0.29
VARS-223ENST00000474643 LZTS1Q9Y250 596 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 INPP5FQ9Y2H2 1132 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 PCDHGC5Q9Y5F6 944 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 GAS2O43903 313 aaKnown RBP16.86■□□□□ 0.29
VARS-223ENST00000474643 NEMFO60524 1076 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 ZC3H11AO75152 810 aaKnown RBP eCLIP16.86■□□□□ 0.29
VARS-223ENST00000474643 ERLIN2O94905 339 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 PBX3P40426 434 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 LARP1BQ659C4 914 aaKnown RBP16.86■□□□□ 0.29
VARS-223ENST00000474643 NOSTRINQ8IVI9 506 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 URGCPQ8TCY9 931 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 RSPH1Q8WYR4 309 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 TMEM169Q96HH4 297 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 DYDC2Q96IM9 177 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 CWH43Q9H720 699 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 RGL1Q9NZL6 768 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 PCDHA12Q9UN75 941 aa16.86■□□□□ 0.29
VARS-223ENST00000474643 PLXNA4Q9HCM2 1894 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 IGKV6-21A0A0C4DH24 114 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 CARNS1A5YM72 827 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 HSP90AA1P07900 732 aaKnown RBP16.85■□□□□ 0.29
VARS-223ENST00000474643 MCM7P33993 719 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 PHKA2P46019 1235 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 ERVFC1P60507 584 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 PLCB3Q01970 1234 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 CUL4AQ13619 759 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 CTTNQ14247 550 aaKnown RBP16.85■□□□□ 0.29
VARS-223ENST00000474643 SMC1AQ14683 1233 aaKnown RBP16.85■□□□□ 0.29
VARS-223ENST00000474643 EMC2Q15006 297 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 CLLU1OSQ5K130 101 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 LLGL2Q6P1M3 1020 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 C4orf19Q8IY42 314 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.29
VARS-223ENST00000474643 TMEM143Q96AN5 459 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 FAM122AQ96E09 287 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 MTRQ99707 1265 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 GBP3Q9H0R5 595 aa16.85■□□□□ 0.29
VARS-223ENST00000474643 ATG2AQ2TAZ0 1938 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 SPDYE4A6NLX3 237 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 GPR37L1O60883 481 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 STBD1O95210 358 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 DUSP6Q16828 381 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 SMRP1Q8NCR6 262 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 PRPF31Q8WWY3 499 aaKnown RBP16.84■□□□□ 0.29
VARS-223ENST00000474643 HAS1Q92839 578 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 LPPQ93052 612 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 FAM193BQ96PV7 902 aaPredicted RBP16.84■□□□□ 0.29
VARS-223ENST00000474643 FAM105AQ9NUU6 356 aa16.84■□□□□ 0.29
VARS-223ENST00000474643 VPS37CA5D8V6 355 aaPredicted RBP16.83■□□□□ 0.28
VARS-223ENST00000474643 ASAP2O43150 1006 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 PDCP20941 246 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 TECP42680 631 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 TXKP42681 527 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 BCAR1P56945 870 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 LAMTOR4Q0VGL1 99 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 COASYQ13057 564 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 TFDP1Q14186 410 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 ZNF174Q15697 407 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 TTC38Q5R3I4 469 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 LRRC55Q6ZSA7 311 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 SRGAP1Q7Z6B7 1085 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 RNF149Q8NC42 400 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 EIF2AK1Q9BQI3 630 aaKnown RBP16.83■□□□□ 0.28
VARS-223ENST00000474643 TTC12Q9H892 705 aaPredicted RBP16.83■□□□□ 0.28
VARS-223ENST00000474643 RNF19AQ9NV58 838 aa16.83■□□□□ 0.28
VARS-223ENST00000474643 USP15Q9Y4E8 981 aaPredicted RBP16.83■□□□□ 0.28
VARS-223ENST00000474643 NT5C1B-RDH14C9J2C7 533 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 EYA4O95677 639 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 GLP2RO95838 553 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.28
VARS-223ENST00000474643 MXD4Q14582 209 aaPredicted RBP16.82■□□□□ 0.28
VARS-223ENST00000474643 NOMO2Q5JPE7 1267 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 ZNF598Q86UK7 904 aaKnown RBP16.82■□□□□ 0.28
VARS-223ENST00000474643 SLC39A11Q8N1S5 342 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 MSLNLQ96KJ4 702 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 RPGRIP1Q96KN7 1286 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 CEP89Q96ST8 783 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 TRIM6Q9C030 488 aaPredicted RBP16.82■□□□□ 0.28
VARS-223ENST00000474643 DHX33Q9H6R0 707 aaKnown RBP16.82■□□□□ 0.28
VARS-223ENST00000474643 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 CLEC1BQ9P126 229 aa16.82■□□□□ 0.28
VARS-223ENST00000474643 PCDHB2Q9Y5E7 798 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms