RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ARHGAP8P85298 464 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 CAP1Q01518 475 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RNASELQ05823 741 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 CUL3Q13618 768 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ZNF423Q2M1K9 1284 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 MINDY4Q4G0A6 757 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 TMEM154Q6P9G4 183 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 SEZ6L2Q6UXD5 910 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RANBP10Q6VN20 620 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 KDELC2Q7Z4H8 507 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 EXOC3L1Q86VI1 746 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 MAP4K3Q8IVH8 894 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 GALNT15Q8N3T1 639 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 MYCBPAPQ8TBZ2 947 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RUFY2Q8WXA3 655 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 MTMR8Q96EF0 704 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ABHD8Q96I13 439 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PRICKLE1Q96MT3 831 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 SECISBP2Q96T21 854 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 GORASP2Q9H8Y8 452 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PDE11AQ9HCR9 933 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 GPRC5BQ9NZH0 403 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 HSPBP1Q9NZL4 362 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 AMACRQ9UHK6 382 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 MROH5Q6ZUA9 1318 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 A0A087WUV0 522 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 GOLGA8JA6NMD2 632 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PHF20L1A8MW92 1017 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 GOLGA8TH3BQL2 631 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 H3BRJ5 948 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 DPYSL4O14531 572 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RPS6KA5O75582 802 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RFPL1O75677 317 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ASMTLO95671 621 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 GOLGA8HP0CJ92 632 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RFC4P35249 363 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 EIF4G2P78344 907 aaKnown RBP eCLIP3.77□□□□□ -1.81
UBR3-208ENST00000474426 SLC14A1Q13336 389 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ZRSR1Q15695 479 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 GRTP1Q5TC63 336 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RPUSD3Q6P087 351 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 OGFOD3Q6PK18 319 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP50Q70EL3 339 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 ILDR2Q71H61 639 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 GALNT7Q86SF2 657 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 FAM124AQ86V42 546 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 CEP97Q8IW35 865 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 CCDC170Q8IYT3 715 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PDCD7Q8N8D1 485 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 ZSCAN1Q8NBB4 408 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 CASP10Q92851 521 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 AIFM3Q96NN9 605 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ACAP3Q96P50 834 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 EMILIN2Q9BXX0 1053 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ZCWPW1Q9H0M4 648 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 LY9Q9HBG7 655 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PREBQ9HCU5 417 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PRM3Q9NNZ6 103 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 IFT80Q9P2H3 777 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 SALL4Q9UJQ4 1053 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 H7C0S8 307 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 GABRDO14764 452 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SULT1B1O43704 296 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 AOC2O75106 756 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 PDHBP11177 359 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 GDI1P31150 447 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 OTUD4Q01804 1114 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 CDC16Q13042 620 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ARHGAP29Q52LW3 1261 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CCDC81Q6ZN84 652 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 GPR142Q7Z601 462 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 GALNT12Q8IXK2 581 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 RAPGEF5Q92565 580 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SMARCE1Q969G3 411 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 GAL3ST1Q99999 423 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 STK33Q9BYT3 514 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 PUS3Q9BZE2 481 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 BHMT2Q9H2M3 363 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TPK1Q9H3S4 243 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CCDC177Q9NQR7 707 aaPredicted RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 BATF3Q9NR55 127 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 EMC3Q9P0I2 261 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SENP1Q9P0U3 644 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 KLHL9Q9P2J3 617 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ZBTB21Q9ULJ3 1066 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 MYO6Q9UM54 1294 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 HPS5Q9UPZ3 1129 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 MED16Q9Y2X0 877 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 HCN4Q9Y3Q4 1203 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 PCDHB4Q9Y5E5 795 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ATP6V1DQ9Y5K8 247 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 NDUFB9Q9Y6M9 179 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TNKSO95271 1327 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 MAPK8IP3Q9UPT6 1336 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CTAGE9A4FU28 777 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 RRN3P2A6NIE6 340 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 IGF2BP3O00425 579 aaKnown RBP eCLIP3.76□□□□□ -1.81
UBR3-208ENST00000474426 POLR2DO15514 142 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 RANBP6O60518 1105 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 CBFA2T3O75081 653 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms