RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 USP25Q9UHP3 1055 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 MYH11P35749 1972 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 ABHD14A-ACY1A0A1B0GW23 586 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 BAIAP3O94812 1187 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 ZNF202O95125 648 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 ZNF131P52739 623 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 MBTD1Q05BQ5 628 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 DMP1Q13316 513 aaPredicted RBP20.02■□□□□ 0.8
SNRPB-203ENST00000474384 CDCA2Q69YH5 1023 aaPredicted RBP20.02■□□□□ 0.8
SNRPB-203ENST00000474384 CATSPER4Q7RTX7 472 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 ZBTB8OSQ8IWT0 167 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 PAGE5Q96GU1 130 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 C2orf40Q9H1Z8 148 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 PARVGQ9HBI0 331 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 KMT5AQ9NQR1 393 aa20.02■□□□□ 0.8
SNRPB-203ENST00000474384 LARSQ9P2J5 1176 aaKnown RBP20.02■□□□□ 0.8
SNRPB-203ENST00000474384 ADGRA3Q8IWK6 1321 aa20.02■□□□□ 0.79
SNRPB-203ENST00000474384 LAMA2P24043 3122 aaKnown RBP20.01■□□□□ 0.79
SNRPB-203ENST00000474384 ENPP3O14638 875 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 SLC16A4O15374 487 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 MGEA5O60502 916 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 IDEP14735 1019 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 CASP1P29466 404 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 RASIP1Q5U651 963 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.01■□□□□ 0.791e-9■■■■■ 78.4
SNRPB-203ENST00000474384 KRBA2Q6ZNG9 492 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 RTN4RL1Q86UN2 441 aaPredicted RBP20.01■□□□□ 0.79
SNRPB-203ENST00000474384 FMR1NBQ8N0W7 255 aaPredicted RBP20.01■□□□□ 0.79
SNRPB-203ENST00000474384 ENGASEQ8NFI3 743 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 SPIRE2Q8WWL2 714 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 GBP4Q96PP9 640 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 C7orf25Q9BPX7 421 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 FTHL17Q9BXU8 183 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 TRIM9Q9C026 710 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 BLZF1Q9H2G9 400 aa20.01■□□□□ 0.79
SNRPB-203ENST00000474384 LIG1P18858 919 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 EFNA5P52803 228 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 SMTNP53814 917 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 WDR5P61964 334 aaKnown RBP20■□□□□ 0.79
SNRPB-203ENST00000474384 FAM160A1Q05DH4 1040 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 SNW1Q13573 536 aaKnown RBP20■□□□□ 0.79
SNRPB-203ENST00000474384 CNNM3Q8NE01 707 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 LINC01599Q8WXQ3 324 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 ADAM2Q99965 735 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 NTPCRQ9BSD7 190 aaKnown RBP20■□□□□ 0.79
SNRPB-203ENST00000474384 MTIF3Q9H2K0 278 aaKnown RBP20■□□□□ 0.79
SNRPB-203ENST00000474384 PANK4Q9NVE7 773 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 KCNG1Q9UIX4 513 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 SLC4A7Q9Y6M7 1214 aa20■□□□□ 0.79
SNRPB-203ENST00000474384 MICAL3Q7RTP6 2002 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.99■□□□□ 0.79
SNRPB-203ENST00000474384 DENND3A2RUS2 1198 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 TRAK2O60296 914 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 EFCAB14O75071 495 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 ERLIN2O94905 339 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 SLC34A2O95436 690 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 ZSCAN20P17040 1043 aaPredicted RBP19.99■□□□□ 0.79
SNRPB-203ENST00000474384 KCNJ6P48051 423 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 UBE2HP62256 183 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 ASIC1P78348 528 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 CUL4BQ13620 913 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 DSC3Q14574 896 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 AMHR2Q16671 573 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 SFR1Q86XK3 245 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 CCDC113Q9H0I3 377 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 FZD8Q9H461 694 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 ARHGAP28Q9P2N2 729 aa19.99■□□□□ 0.79
SNRPB-203ENST00000474384 PIN4Q9Y237 131 aaKnown RBP19.99■□□□□ 0.79
SNRPB-203ENST00000474384 K7ERI5 159 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 B4GALT5O43286 388 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 TSPAN1O60635 241 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 NR1I2O75469 434 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 GAP43P17677 238 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 HOXA11P31270 313 aaPredicted RBP19.98■□□□□ 0.79
SNRPB-203ENST00000474384 NCKAP1LP55160 1127 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 DEFB103AP81534 67 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 PCBP1Q15365 356 aaKnown RBP eCLIP19.98■□□□□ 0.799e-9■■■■□ 24.2
SNRPB-203ENST00000474384 MAPK6Q16659 721 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 CNNM4Q6P4Q7 775 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 FAM178BQ8IXR5 827 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 TMEM161BQ8NDZ6 487 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 TSPYL2Q9H2G4 693 aaPredicted RBP19.98■□□□□ 0.79
SNRPB-203ENST00000474384 CHST12Q9NRB3 414 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 RGS18Q9NS28 235 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 AGPAT5Q9NUQ2 364 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 PRMT7Q9NVM4 692 aaPredicted RBP19.98■□□□□ 0.79
SNRPB-203ENST00000474384 TBC1D7Q9P0N9 293 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 USP20Q9Y2K6 914 aa19.98■□□□□ 0.79
SNRPB-203ENST00000474384 FRMD3A2A2Y4 597 aa19.97■□□□□ 0.79
SNRPB-203ENST00000474384 AMHP03971 560 aa19.97■□□□□ 0.79
SNRPB-203ENST00000474384 PRKCBP05771 671 aa19.97■□□□□ 0.79
SNRPB-203ENST00000474384 IBSPP21815 317 aaPredicted RBP19.97■□□□□ 0.79
SNRPB-203ENST00000474384 NMT1P30419 496 aaKnown RBP19.97■□□□□ 0.79
SNRPB-203ENST00000474384 NCBP1Q09161 790 aaKnown RBP19.97■□□□□ 0.79
SNRPB-203ENST00000474384 HERC4Q5GLZ8 1057 aaPredicted RBP19.97■□□□□ 0.79
SNRPB-203ENST00000474384 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
SNRPB-203ENST00000474384 FAM43BQ6ZT52 329 aaPredicted RBP19.97■□□□□ 0.79
SNRPB-203ENST00000474384 TAS1R3Q7RTX0 852 aa19.97■□□□□ 0.79
SNRPB-203ENST00000474384 HAUS6Q7Z4H7 955 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 328.1 ms