RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NR2F2P24468 414 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 EEF1GP26641 437 aaKnown RBP11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 ARL2P36404 184 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 ACLYP53396 1101 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 MAPK6Q16659 721 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 ANKRD40Q6AI12 368 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 FOXR2Q6PJQ5 311 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 EPM2AIP1Q7L775 607 aaPredicted RBP11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 USP37Q86T82 979 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 ASAP3Q8TDY4 903 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 CEP63Q96MT8 703 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 INO80BQ9C086 356 aaPredicted RBP11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 STARD7Q9NQZ5 370 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 TBX20Q9UMR3 447 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 EVPLQ92817 2033 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 IGKV6-21A0A0C4DH24 114 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 A0A0U1RQG5 324 aaPredicted RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 SMIM35A0A1B0GVV1 85 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 ZBTB42B2RXF5 422 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 HAS3O00219 553 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 NR3C1P04150 777 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 PRKCBP05771 671 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 PTMAP06454 111 aaKnown RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 KRT13P13646 458 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 CASP5P51878 434 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 NKX3-2P78367 333 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 GTF2BQ00403 316 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 ADAM9Q13443 819 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 CAPSQ13938 189 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 TTI2Q6NXR4 508 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 ZNF410Q86VK4 478 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 MAP4K3Q8IVH8 894 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 TMEM161BQ8NDZ6 487 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 GLIS3Q8NEA6 775 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 KLHDC9Q8NEP7 349 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 KAT2BQ92831 832 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 DEFB118Q96PH6 123 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 NTPCRQ9BSD7 190 aaKnown RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 KIFC3Q9BVG8 833 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 MRPL4Q9BYD3 311 aaKnown RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 SEZ6LQ9BYH1 1024 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 GCOM2Q9BZD3 368 aaPredicted RBP11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 UNC93B1Q9H1C4 597 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 HDAC6Q9UBN7 1215 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 TRAF3IP3Q9Y228 551 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 GINS2Q9Y248 185 aa11.26□□□□□ -0.61
PRPF38A-202ENST00000474048 DNM1LO00429 736 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 KIAA0391O15091 583 aaKnown RBP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 SLC16A3O15427 465 aaKnown RBP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 EXOC3O60645 756 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 VTNP04004 478 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 TPM1P09493 284 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 SFPQP23246 707 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 CYP2J2P51589 502 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 UBASH3AP57075 661 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 IRX5P78411 483 aaPredicted RBP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 FANCCQ00597 558 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 ITGA7Q13683 1181 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 FKBP15Q5T1M5 1219 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 SLFN12LQ6IEE8 588 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 NME8Q8N427 588 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 BSNDQ8WZ55 320 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 POMGNT1Q8WZA1 660 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 CEP89Q96ST8 783 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 PPP1R16BQ96T49 567 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 ADPGKQ9BRR6 497 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 FGFBP2Q9BYJ0 223 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 METTL14Q9HCE5 456 aaKnown RBP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 SAMSN1Q9NSI8 373 aaKnown RBP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 PRMT7Q9NVM4 692 aaPredicted RBP11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 ARHGAP28Q9P2N2 729 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
PRPF38A-202ENST00000474048 N4BP3O15049 544 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 CLIC2O15247 247 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 TLR3O15455 904 aaKnown RBP11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 ADCY5O95622 1261 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 LDHAP00338 332 aaKnown RBP11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 NLRP11P59045 1033 aaKnown RBP11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 PPP2R3AQ06190 1150 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 POU5F1BQ06416 359 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 PRPF4BQ13523 1007 aaKnown RBP11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 NCAPHQ15003 741 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms