RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 ZBTB39O15060 712 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 SLITRK3O94933 977 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 RBM10P98175 930 aaKnown RBP17.38■□□□□ 0.37
CLIC3-201ENST00000473911 LAMTOR4Q0VGL1 99 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 CLLU1OSQ5K130 101 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 HELQQ8TDG4 1101 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 MSLNLQ96KJ4 702 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 FBXL18Q96ME1 805 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 ZNF558Q96NG5 402 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 TLR9Q9NR96 1032 aa17.38■□□□□ 0.37
CLIC3-201ENST00000473911 SKIP12755 728 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 PHKA2P46019 1235 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 NRIP1P48552 1158 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 NDUFV1P49821 464 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 RBM23Q86U06 439 aaKnown RBP17.37■□□□□ 0.37
CLIC3-201ENST00000473911 ZNF598Q86UK7 904 aaKnown RBP17.37■□□□□ 0.37
CLIC3-201ENST00000473911 RNF135Q8IUD6 432 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 MTMR9Q96QG7 549 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 KIF2CQ99661 725 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 MTRQ99707 1265 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 IFT122Q9HBG6 1241 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 PUF60Q9UHX1 559 aaKnown RBP17.37■□□□□ 0.37
CLIC3-201ENST00000473911 CD207Q9UJ71 328 aa17.37■□□□□ 0.37
CLIC3-201ENST00000473911 FNDC1Q4ZHG4 1894 aaPredicted RBP17.37■□□□□ 0.37
CLIC3-201ENST00000473911 ASAP2O43150 1006 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 GLP2RO95838 553 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 ATF7P17544 494 aaPredicted RBP17.36■□□□□ 0.37
CLIC3-201ENST00000473911 PPM1AP35813 382 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 RBM25P49756 843 aaKnown RBP17.36■□□□□ 0.37
CLIC3-201ENST00000473911 MRE11P49959 708 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 NHLH1Q02575 133 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 SMAD4Q13485 552 aaKnown RBP17.36■□□□□ 0.37
CLIC3-201ENST00000473911 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 KCNT2Q6UVM3 1135 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 SRGAP1Q7Z6B7 1085 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 RNF149Q8NC42 400 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 HSD17B14Q9BPX1 270 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 TRAIPQ9BWF2 469 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 MRPL9Q9BYD2 267 aaKnown RBP17.36■□□□□ 0.37
CLIC3-201ENST00000473911 TMEM60Q9H2L4 133 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 FOXP1Q9H334 677 aaPredicted RBP17.36■□□□□ 0.37
CLIC3-201ENST00000473911 TLE6Q9H808 572 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 USP34Q70CQ2 3546 aa17.36■□□□□ 0.37
CLIC3-201ENST00000473911 POTEMA6NI47 508 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 LYPLA2O95372 231 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 PBX3P40426 434 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 RAB27AP51159 221 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 KRT17Q04695 432 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 ZNF174Q15697 407 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 PDE12Q6L8Q7 609 aaKnown RBP17.35■□□□□ 0.37
CLIC3-201ENST00000473911 GLB1LQ6UWU2 654 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 FERMT3Q86UX7 667 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 EFHBQ8N7U6 833 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 FBXO18Q8NFZ0 1043 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 MRPS27Q92552 414 aaKnown RBP17.35■□□□□ 0.37
CLIC3-201ENST00000473911 LPPQ93052 612 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
CLIC3-201ENST00000473911 ENTPD7Q9NQZ7 604 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 ANKEF1Q9NU02 776 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 AGPAT5Q9NUQ2 364 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 FAM105AQ9NUU6 356 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 SPG21Q9NZD8 308 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 BARX2Q9UMQ3 279 aaPredicted RBP17.35■□□□□ 0.37
CLIC3-201ENST00000473911 LZTS1Q9Y250 596 aa17.35■□□□□ 0.37
CLIC3-201ENST00000473911 PER2O15055 1255 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 DGAT1O75907 488 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 EYA4O95677 639 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 ERVFC1P60507 584 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 PLCB3Q01970 1234 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 TFDP1Q14186 410 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 MXD4Q14582 209 aaPredicted RBP17.34■□□□□ 0.37
CLIC3-201ENST00000473911 RABEP1Q15276 862 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 HERC4Q5GLZ8 1057 aaPredicted RBP17.34■□□□□ 0.37
CLIC3-201ENST00000473911 PLPP4Q5VZY2 271 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 VN1R2Q8NFZ6 395 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 PIGOQ8TEQ8 1089 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 PGBD4Q96DM1 585 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 PHOX2BQ99453 314 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 MINDY3Q9H8M7 445 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 NOL7Q9UMY1 257 aaKnown RBP17.34■□□□□ 0.37
CLIC3-201ENST00000473911 INPP5FQ9Y2H2 1132 aa17.34■□□□□ 0.37
CLIC3-201ENST00000473911 WDR81Q562E7 1941 aa17.33■□□□□ 0.37
CLIC3-201ENST00000473911 ST18O60284 1047 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 ERLIN2O94905 339 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 OR52Z1P0C646 297 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 TECP42680 631 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 ALDH7A1P49419 539 aaKnown RBP17.33■□□□□ 0.36
CLIC3-201ENST00000473911 ORC2Q13416 577 aaPredicted RBP17.33■□□□□ 0.36
CLIC3-201ENST00000473911 TTC38Q5R3I4 469 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 NOSTRINQ8IVI9 506 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 TCF25Q9BQ70 676 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 PCDHB2Q9Y5E7 798 aa17.33■□□□□ 0.36
CLIC3-201ENST00000473911 A0A087WWV3 80 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 FSD2A1L4K1 749 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 INO80B-WBP1J3KQ70 363 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 FSCN2O14926 492 aa17.32■□□□□ 0.36
CLIC3-201ENST00000473911 USO1O60763 962 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms