RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 PPM1AP35813 382 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 ALDH7A1P49419 539 aaKnown RBP13.36□□□□□ -0.27
SMPD4-217ENST00000473720 BCAR1P56945 870 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 PLCB3Q01970 1234 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 RNASELQ05823 741 aaKnown RBP13.36□□□□□ -0.27
SMPD4-217ENST00000473720 COASYQ13057 564 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 TRIM29Q14134 588 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 EPHA7Q15375 998 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 PDE12Q6L8Q7 609 aaKnown RBP13.36□□□□□ -0.27
SMPD4-217ENST00000473720 ZNF598Q86UK7 904 aaKnown RBP13.36□□□□□ -0.27
SMPD4-217ENST00000473720 RNF135Q8IUD6 432 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 SLFN12Q8IYM2 578 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 PSPC1Q8WXF1 523 aaKnown RBP13.36□□□□□ -0.27
SMPD4-217ENST00000473720 GTF3C6Q969F1 213 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 RPGRIP1Q96KN7 1286 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
SMPD4-217ENST00000473720 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 FAM105AQ9NUU6 356 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 LZTS1Q9Y250 596 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 BTBD18B2RXH4 712 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 TBX3O15119 743 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 EYA4O95677 639 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 SRGAP2BP0DMP2 458 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 PLA2G5P39877 138 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 GUCY1B3Q02153 619 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 EMC2Q15006 297 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 CALCRLQ16602 461 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 OTUD6AQ7L8S5 288 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 SLC39A11Q8N1S5 342 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 TMEM87AQ8NBN3 555 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 NSUN7Q8NE18 718 aaKnown RBP13.35□□□□□ -0.27
SMPD4-217ENST00000473720 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
SMPD4-217ENST00000473720 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
SMPD4-217ENST00000473720 CDCA3Q99618 268 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-217ENST00000473720 MTRQ99707 1265 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
SMPD4-217ENST00000473720 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
SMPD4-217ENST00000473720 TECTAO75443 2155 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 A0A087WWV3 80 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 WNT7AO00755 349 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 SEC24BO95487 1268 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 SKIP12755 728 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 RFC5P40937 340 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 TXKP42681 527 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
SMPD4-217ENST00000473720 NOMO2Q5JPE7 1267 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 GLB1LQ6UWU2 654 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 DIS3L2Q8IYB7 885 aaKnown RBP13.34□□□□□ -0.27
SMPD4-217ENST00000473720 EXOC8Q8IYI6 725 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 VPS52Q8N1B4 723 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 AUTS2Q8WXX7 1259 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 EIF2AK1Q9BQI3 630 aaKnown RBP13.34□□□□□ -0.27
SMPD4-217ENST00000473720 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
SMPD4-217ENST00000473720 ZSWIM4Q9H7M6 989 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 NRDE2Q9H7Z3 1164 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-217ENST00000473720 MINDY3Q9H8M7 445 aa13.34□□□□□ -0.27
SMPD4-217ENST00000473720 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.27
SMPD4-217ENST00000473720 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-217ENST00000473720 NEMFO60524 1076 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 ERLIN2O94905 339 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 CXCL14O95715 111 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 RAB27AP51159 221 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 SPIRE1Q08AE8 756 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
SMPD4-217ENST00000473720 ANKRD54Q6NXT1 300 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 SRGAP1Q7Z6B7 1085 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 TMEM173Q86WV6 379 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-217ENST00000473720 URGCPQ8TCY9 931 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 TCP11Q8WWU5 503 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 TNFRSF25Q93038 417 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 PGBD4Q96DM1 585 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 CPB2Q96IY4 423 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-217ENST00000473720 PHF7Q9BWX1 381 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-217ENST00000473720 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 AGPAT5Q9NUQ2 364 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 TBC1D13Q9NVG8 400 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 CDH22Q9UJ99 828 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 DENND4AQ7Z401 1863 aa13.33□□□□□ -0.28
SMPD4-217ENST00000473720 FSD2A1L4K1 749 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 C2orf71A6NGG8 1288 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 OFD1O75665 1012 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 SLITRK3O94933 977 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 POMCP01189 267 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMPD4-217ENST00000473720 MCM7P33993 719 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 CBX2Q14781 532 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-217ENST00000473720 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 ZNF280BQ86YH2 543 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
SMPD4-217ENST00000473720 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms