RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SNCAIPQ9Y6H5 919 aa5.59□□□□□ -1.51
TMEM39A-206ENST00000473684 BCL9LQ86UU0 1499 aa5.59□□□□□ -1.52
TMEM39A-206ENST00000473684 CPSF1Q10570 1443 aaKnown RBP5.59□□□□□ -1.52
TMEM39A-206ENST00000473684 GMNCA6NCL1 334 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 NR1D1P20393 614 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP6V1C1P21283 382 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SP100P23497 879 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CD97P48960 835 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 AMPD2Q01433 879 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 NCAPHQ15003 741 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF569Q5MCW4 686 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 WIPI1Q5MNZ9 446 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 EGFLAMQ63HQ2 1017 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 FAAH2Q6GMR7 532 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CATIPQ7Z7H3 387 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 TRIML1Q8N9V2 468 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 IRGQQ8WZA9 623 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 PLPPR2Q96GM1 343 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 RNPC3Q96LT9 517 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC28BQ9BUN5 200 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 PUS3Q9BZE2 481 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 TM6SF1Q9BZW5 370 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 TNKS2Q9H2K2 1166 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 MRPL44Q9H9J2 332 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 DDX21Q9NR30 783 aaKnown RBP eCLIP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC12A4Q9UP95 1085 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 N6AMT1Q9Y5N5 214 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 MRPL42Q9Y6G3 142 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 PXDNQ92626 1479 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP10DQ9P241 1426 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 FAM221BA6H8Z2 402 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 TMEM110-MUSTN1A8MSY1 372 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 HMGB1P1B2RPK0 211 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 OIP5O43482 229 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SERPINC1P01008 464 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 KRT9P35527 623 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CCT8P50990 548 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 NLRP12P59046 1061 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 COL9A3Q14050 684 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 MAP7Q14244 749 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SUZ12Q15022 739 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 DDR2Q16832 855 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CFAP100Q494V2 611 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CFAP157Q5JU67 520 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 GKAP1Q5VSY0 366 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF662Q6ZS27 426 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 EXOC3L1Q86VI1 746 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CD302Q8IX05 232 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 GALNT11Q8NCW6 608 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 STKLD1Q8NE28 680 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 ENGASEQ8NFI3 743 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 TAF4BQ92750 862 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 WDR89Q96FK6 387 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SNX27Q96L92 541 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 NR1H4Q96RI1 486 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 EIF2AQ9BY44 585 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 MIS12Q9H081 205 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC113Q9H0I3 377 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 TAOK3Q9H2K8 898 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 KCNMB3Q9NPA1 279 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 LRRC4BQ9NT99 713 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 RMND1Q9NWS8 449 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SNX14Q9Y5W7 946 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 LMO7Q8WWI1 1683 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 BCL9O00512 1426 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CEMIPQ8WUJ3 1361 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 AOX1Q06278 1338 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 MEIS3P2A8K0S8 358 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 ACADSP16219 412 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 BYSLQ13895 437 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC44A4Q53GD3 710 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 IRGCQ6NXR0 463 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 PNMA8AQ86V59 439 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 USP33Q8TEY7 942 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CAVIN3Q969G5 261 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 AZIN2Q96A70 460 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 ABHD8Q96I13 439 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SYT15Q9BQS2 421 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 SIL1Q9H173 461 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 RABL2AQ9UBK7 228 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 RCOR1Q9UKL0 485 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 R3HDM2Q9Y2K5 976 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 LEMD3Q9Y2U8 911 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 TTLL3Q9Y4R7 772 aa5.58□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC162PA2VCL2 907 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 CCT8L1PA6NM43 557 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SHISA8B8ZZ34 492 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 LSM1O15116 133 aaKnown RBP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 KDM1AO60341 852 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 HTR3BO95264 441 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 SLURP2P0DP57 97 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 NID1P14543 1247 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 KCNA2P16389 499 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 EPHB4P54760 987 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 GUCY1A3Q02108 690 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 OR52E8Q6IFG1 317 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 FERMT3Q86UX7 667 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 C19orf47Q8N9M1 422 aaKnown RBP5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 TC2NQ8N9U0 490 aa5.57□□□□□ -1.52
TMEM39A-206ENST00000473684 LINS1Q8NG48 757 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 581.2 ms