RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 CYP26B1Q9NR63 512 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 MIOSQ9NXC5 875 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 USTQ9Y2C2 406 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 NID2Q14112 1375 aa10.85□□□□□ -0.67
MCF2L-223ENST00000473345 SPTBN4Q9H254 2564 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 M0R2N6 131 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 PRPF3O43395 683 aaKnown RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 RFPL2O75678 378 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 NEFLP07196 543 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 HOXA11P31270 313 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 POLGP54098 1239 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 SETQ01105 290 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 TBC1D8BQ0IIM8 1120 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 SYNE3Q6ZMZ3 975 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 FAM43BQ6ZT52 329 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 CABP7Q86V35 215 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 TEX2Q8IWB9 1127 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 RNF168Q8IYW5 571 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 DTWD2Q8NBA8 298 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 NKD2Q969F2 451 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 ZNF707Q96C28 371 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 RMDN1Q96DB5 314 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 CCDC136Q96JN2 1154 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 FAM167AQ96KS9 214 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 B3GALT6Q96L58 329 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 AIFM3Q96NN9 605 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 IRF2BPLQ9H1B7 796 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 RNF39Q9H2S5 420 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 NCOA5Q9HCD5 579 aaKnown RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 DZANK1Q9NVP4 752 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 DUSP12Q9UNI6 340 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 CEP131Q9UPN4 1083 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
MCF2L-223ENST00000473345 R4GN57 208 aa10.84□□□□□ -0.67
MCF2L-223ENST00000473345 MYH9P35579 1960 aaKnown RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 PTPRZ1P23471 2315 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 POTEMA6NI47 508 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 ZNF623O75123 536 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 LRRN2O75325 713 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 CFHP08603 1231 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 SPATA31D3P0C874 917 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 GLULP15104 373 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 ID4P47928 161 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 NPEPPSP55786 919 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 TDGQ13569 410 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 MCTP2Q6DN12 878 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 TWF2Q6IBS0 349 aaKnown RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 SPATA31D4Q6ZUB0 917 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 Q6ZUG5 572 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 MRPL10Q7Z7H8 261 aaKnown RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 RHPN2Q8IUC4 686 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 SMG8Q8ND04 991 aaKnown RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 ETNPPLQ8TBG4 499 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 RIN2Q8WYP3 895 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 KCNB2Q92953 911 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 BRF1Q92994 677 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 NLRP4Q96MN2 994 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 SCLT1Q96NL6 688 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 RPP25Q9BUL9 199 aaKnown RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 MRPL9Q9BYD2 267 aaKnown RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 MFSD1Q9H3U5 465 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 CHST12Q9NRB3 414 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 RNF216Q9NWF9 866 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 DLGAP2Q9P1A6 1054 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 SUCLA2Q9P2R7 463 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 CACNG4Q9UBN1 327 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 NAP1L2Q9ULW6 460 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-223ENST00000473345 PCDHB2Q9Y5E7 798 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 GVINP1Q7Z2Y8 2422 aa10.83□□□□□ -0.68
MCF2L-223ENST00000473345 C2CD2LO14523 706 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 NRP1O14786 923 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 ZBTB39O15060 712 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 TEX28O15482 410 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 SLC37A4O43826 429 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 GAS7O60861 476 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 MAFO75444 373 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-223ENST00000473345 POMCP01189 267 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 TMOD1P28289 359 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 LRCH2Q5VUJ6 765 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 MAML2Q8IZL2 1156 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-223ENST00000473345 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 TBCKQ8TEA7 893 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 RABGGTAQ92696 567 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 MBOAT7Q96N66 472 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 RIT2Q99578 217 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 EIF2AQ9BY44 585 aaKnown RBP10.82□□□□□ -0.68
MCF2L-223ENST00000473345 SFXN1Q9H9B4 322 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 C6orf50Q9HD87 102 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 MAN1C1Q9NR34 630 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 NRBP2Q9NSY0 501 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-223ENST00000473345 AGPAT5Q9NUQ2 364 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 DACT1Q9NYF0 836 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms