RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 TFDP1Q14186 410 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 PTPAQ15257 358 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 PCBP1Q15365 356 aaKnown RBP eCLIP10.16□□□□□ -0.78
C1orf56-203ENST00000473308 AMHR2Q16671 573 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 HYIQ5T013 277 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 TWF2Q6IBS0 349 aaKnown RBP10.16□□□□□ -0.78
C1orf56-203ENST00000473308 KCNK18Q7Z418 384 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 RNF169Q8NCN4 708 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 BSNDQ8WZ55 320 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 PNMA5Q96PV4 448 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 PLVAPQ9BX97 442 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 NFKBIZQ9BYH8 718 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 TMEM117Q9H0C3 514 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 CWH43Q9H720 699 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 TYW1Q9NV66 732 aaKnown RBP10.16□□□□□ -0.78
C1orf56-203ENST00000473308 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 DNM3Q9UQ16 869 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 CLIC4Q9Y696 253 aa10.16□□□□□ -0.78
C1orf56-203ENST00000473308 KIAA1671Q9BY89 1806 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 INO80B-WBP1J3KQ70 363 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 GRM6O15303 877 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 TSPAN1O60635 241 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 ZNF623O75123 536 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 SKIP12755 728 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 RAB27AP51159 221 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 GRIN1Q05586 938 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 TMEM119Q4V9L6 283 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 CLLU1OSQ5K130 101 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 UBXN11Q5T124 520 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 CDCA2Q69YH5 1023 aaPredicted RBP10.15□□□□□ -0.78
C1orf56-203ENST00000473308 FAM173BQ6P4H8 233 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 LRRC55Q6ZSA7 311 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.15□□□□□ -0.78
C1orf56-203ENST00000473308 C11orf84Q9BUA3 381 aaPredicted RBP10.15□□□□□ -0.78
C1orf56-203ENST00000473308 POLD4Q9HCU8 107 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 FAM105AQ9NUU6 356 aa10.15□□□□□ -0.78
C1orf56-203ENST00000473308 NCOR1O75376 2440 aa10.15□□□□□ -0.79
C1orf56-203ENST00000473308 LRRIQ4A6NIV6 560 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 MEIS3P2A8K0S8 358 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 ERLIN2O94905 339 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 ITGB1P05556 798 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 ARF4P18085 180 aaPredicted RBP10.14□□□□□ -0.79
C1orf56-203ENST00000473308 AXLP30530 894 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 LONP1P36776 959 aaKnown RBP10.14□□□□□ -0.79
C1orf56-203ENST00000473308 CAMK1Q14012 370 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
C1orf56-203ENST00000473308 PTPROQ16827 1216 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 LONRF3Q496Y0 759 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 NAALADL2Q58DX5 795 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 RINT1Q6NUQ1 792 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 PPP4R3CPQ6ZMV5 832 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 C1orf186Q6ZWK4 172 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 MRPL10Q7Z7H8 261 aaKnown RBP10.14□□□□□ -0.79
C1orf56-203ENST00000473308 CABP7Q86V35 215 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 KLHL23Q8NBE8 558 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 SPPL3Q8TCT6 385 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 HELQQ8TDG4 1101 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 LPPQ93052 612 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 P2RX5Q93086 422 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 MRPL38Q96DV4 380 aaKnown RBP10.14□□□□□ -0.79
C1orf56-203ENST00000473308 CPB2Q96IY4 423 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 AK8Q96MA6 479 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 PLIN2Q99541 437 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 RUSC1Q9BVN2 902 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 NT5C3AQ9H0P0 336 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 ZSCAN16Q9H4T2 348 aaPredicted RBP10.14□□□□□ -0.79
C1orf56-203ENST00000473308 ALG13Q9NP73 1137 aaKnown RBP10.14□□□□□ -0.79
C1orf56-203ENST00000473308 PLAGL2Q9UPG8 496 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 PCDHB2Q9Y5E7 798 aa10.14□□□□□ -0.79
C1orf56-203ENST00000473308 B4GALT5O43286 388 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 SLC26A4O43511 780 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 HIP1RO75146 1068 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 OFD1O75665 1012 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 DNAJB1P25685 340 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 MARCKSP29966 332 aaPredicted RBP10.13□□□□□ -0.79
C1orf56-203ENST00000473308 NAMPTP43490 491 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 CEBPZQ03701 1054 aaKnown RBP10.13□□□□□ -0.79
C1orf56-203ENST00000473308 FAM187BQ17R55 369 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 SPOUT1Q5T280 376 aaKnown RBP10.13□□□□□ -0.79
C1orf56-203ENST00000473308 NOTUMQ6P988 496 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 AGMOQ6ZNB7 445 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 ZBTB8OSQ8IWT0 167 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 ABI1Q8IZP0 508 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 DAW1Q8N136 415 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 LRRC43Q8N309 656 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 KCTD17Q8N5Z5 321 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 COLGALT1Q8NBJ5 622 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 SMG8Q8ND04 991 aaKnown RBP10.13□□□□□ -0.79
C1orf56-203ENST00000473308 LRRC15Q8TF66 581 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 KIFAP3Q92845 792 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 CCDC51Q96ER9 411 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 USP28Q96RU2 1077 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 EIF2AQ9BY44 585 aaKnown RBP10.13□□□□□ -0.79
C1orf56-203ENST00000473308 LMAN2LQ9H0V9 348 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 FZD8Q9H461 694 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 AAASQ9NRG9 546 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
C1orf56-203ENST00000473308 ATG2AQ2TAZ0 1938 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms