RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ATP6V1DQ9Y5K8 247 aa14.56□□□□□ -0.08
TPM3-216ENST00000473036 STK24Q9Y6E0 443 aa14.56□□□□□ -0.08
TPM3-216ENST00000473036 ADGRA3Q8IWK6 1321 aa14.56□□□□□ -0.08
TPM3-216ENST00000473036 MYH11P35749 1972 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 GAS2O43903 313 aaKnown RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 PPP6R2O75170 966 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 YEATS4O95619 227 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 PLA2G4BP0C869 781 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 HOXA11P31270 313 aaPredicted RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 UBA7P41226 1012 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 KCNQ1P51787 676 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 PTENP60484 403 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 HTRA4P83105 476 aaPredicted RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 AMHR2Q16671 573 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 FAM102BQ5T8I3 360 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 SHC4Q6S5L8 630 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 SYT2Q8N9I0 419 aaPredicted RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 RNF149Q8NC42 400 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 TCP11Q8WWU5 503 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 NECAB3Q96P71 396 aaPredicted RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 ADAM2Q99965 735 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 LRFN3Q9BTN0 628 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 GCOM2Q9BZD3 368 aaPredicted RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 RC3H2Q9HBD1 1191 aaKnown RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 RGS18Q9NS28 235 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 CHMP5Q9NZZ3 219 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 RCOR1Q9UKL0 485 aa14.55□□□□□ -0.08
TPM3-216ENST00000473036 FNDC1Q4ZHG4 1894 aaPredicted RBP14.55□□□□□ -0.08
TPM3-216ENST00000473036 PRRC2BQ5JSZ5 2229 aaKnown RBP14.54□□□□□ -0.08
TPM3-216ENST00000473036 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 C9IYK1 514 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 GPR182O15218 404 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 EFCAB14O75071 495 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 UPP2O95045 317 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 GATMP50440 423 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 FAM189BP81408 668 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 TAP1Q03518 808 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 MBTD1Q05BQ5 628 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 MCM6Q14566 821 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 EXOC8Q8IYI6 725 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 ZNF710Q8N1W2 664 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 MCPH1Q8NEM0 835 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 RAD54LQ92698 747 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 CCDC43Q96MW1 224 aaKnown RBP14.54□□□□□ -0.08
TPM3-216ENST00000473036 KIFC3Q9BVG8 833 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 PANK2Q9BZ23 570 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 RNF19AQ9NV58 838 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 USP20Q9Y2K6 914 aa14.54□□□□□ -0.08
TPM3-216ENST00000473036 SFI1A8K8P3 1242 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 ASAP2O43150 1006 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 SLC26A4O43511 780 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 AMHP03971 560 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 LINC00271P0C7V0 271 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 ATF7P17544 494 aaPredicted RBP14.53□□□□□ -0.08
TPM3-216ENST00000473036 CDC42EP1Q00587 391 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
TPM3-216ENST00000473036 POU5F1BQ06416 359 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 RAD51AP2Q09MP3 1159 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 MXD4Q14582 209 aaPredicted RBP14.53□□□□□ -0.08
TPM3-216ENST00000473036 CDCA2Q69YH5 1023 aaPredicted RBP14.53□□□□□ -0.08
TPM3-216ENST00000473036 LEO1Q8WVC0 666 aaPredicted RBP14.53□□□□□ -0.08
TPM3-216ENST00000473036 SCLT1Q96NL6 688 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 FTHL17Q9BXU8 183 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 NT5C3AQ9H0P0 336 aa14.53□□□□□ -0.08
TPM3-216ENST00000473036 KIAA1671Q9BY89 1806 aa14.52□□□□□ -0.08
TPM3-216ENST00000473036 EPOPA6NHQ4 379 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 B4GALT5O43286 388 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 HIP1RO75146 1068 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 GUCY2CP25092 1073 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 E2F4Q16254 413 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 UBXN11Q5T124 520 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 SRGAP1Q7Z6B7 1085 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
TPM3-216ENST00000473036 ARNTL2Q8WYA1 636 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 ZNF689Q96CS4 500 aaPredicted RBP14.52□□□□□ -0.09
TPM3-216ENST00000473036 CALML4Q96GE6 196 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 RAD9AQ99638 391 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 NFKBIZQ9BYH8 718 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 CCDC113Q9H0I3 377 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 AGPAT5Q9NUQ2 364 aa14.52□□□□□ -0.09
TPM3-216ENST00000473036 MEIS3P2A8K0S8 358 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 PI4K2BG5E9Z4 385 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 TSPAN1O60635 241 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 CUTAO60888 179 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 DGKIO75912 1065 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 SSBP05455 408 aaKnown RBP eCLIP14.51□□□□□ -0.09
TPM3-216ENST00000473036 SARSP49591 514 aaKnown RBP14.51□□□□□ -0.09
TPM3-216ENST00000473036 DHX8Q14562 1220 aaKnown RBP14.51□□□□□ -0.09
TPM3-216ENST00000473036 ATL3Q6DD88 541 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 TAS1R3Q7RTX0 852 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 CATSPER4Q7RTX7 472 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 ZNF598Q86UK7 904 aaKnown RBP14.51□□□□□ -0.09
TPM3-216ENST00000473036 KCTD17Q8N5Z5 321 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 CPB2Q96IY4 423 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 CDK5RAP3Q96JB5 506 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 GDPD2Q9HCC8 539 aa14.51□□□□□ -0.09
TPM3-216ENST00000473036 TCF20Q9UGU0 1960 aaKnown RBP14.51□□□□□ -0.09
TPM3-216ENST00000473036 NLRC5Q86WI3 1866 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms