RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 GFM2Q969S9 779 aaKnown RBP6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 AJUBAQ96IF1 538 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 PAWRQ96IZ0 340 aaKnown RBP6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 FMNL2Q96PY5 1086 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 SOX7Q9BT81 388 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 OSBPL6Q9BZF3 934 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 KATNBL1Q9H079 304 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 CSRNP2Q9H175 543 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 FAM184BQ9ULE4 1060 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 VWA7Q9Y334 891 aa6.36□□□□□ -1.39
PRPF40A-208ENST00000472760 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 HNRNPLP14866 589 aaKnown RBP eCLIP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 SLC16A1P53985 500 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 ADKP55263 362 aaKnown RBP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 CD69Q07108 199 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 PCOLCEQ15113 449 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 ZNF124Q15973 351 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 ADRM1Q16186 407 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 MUM1L1Q5H9M0 696 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 FAM102BQ5T8I3 360 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 TRIM68Q6AZZ1 485 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 FAM180AQ6UWF9 173 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 TPH2Q8IWU9 490 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 KLHL36Q8N4N3 616 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 LCORQ96JN0 433 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 CCDC136Q96JN2 1154 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 UIMC1Q96RL1 719 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 NUP88Q99567 741 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 FDXACB1Q9BRP7 624 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 ADI1Q9BV57 179 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 SAP30BPQ9UHR5 308 aaKnown RBP6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 TUBD1Q9UJT1 453 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 DNM3Q9UQ16 869 aa6.35□□□□□ -1.39
PRPF40A-208ENST00000472760 C9orf118A6NHY6 69 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 ZRANB2O95218 330 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 LY86O95711 162 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 CYP2C19P33261 490 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 MRE11P49959 708 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 RRADP55042 308 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 MALLQ13021 153 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 ADAM15Q13444 863 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 TCIRG1Q13488 830 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 USP10Q14694 798 aaKnown RBP6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 MLC1Q15049 377 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 LARP4Q71RC2 724 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 THEMISQ8N1K5 641 aaPredicted RBP6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 GLB1L3Q8NCI6 653 aaPredicted RBP6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 PPP1R14CQ8TAE6 165 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 NKD2Q969F2 451 aaPredicted RBP6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 GREM2Q9H772 168 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 ADAM29Q9UKF5 820 aa6.34□□□□□ -1.39
PRPF40A-208ENST00000472760 GOLGA6CA6NDK9 693 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 GOLGA6BA6NDN3 693 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 GOLGA6DP0CG33 693 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 ZNF888P0CJ79 500 aaPredicted RBP6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 GSPT1P15170 499 aaKnown RBP6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 CSF2RBP32927 897 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 TXKP42681 527 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 ZMAT1Q5H9K5 638 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 CCDC181Q5TID7 509 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 NXNQ6DKJ4 435 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 CXorf57Q6NSI4 855 aaKnown RBP6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 NOL8Q76FK4 1167 aaKnown RBP6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 GPR155Q7Z3F1 870 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 FAM124AQ86V42 546 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 ZNF761Q86XN6 746 aaPredicted RBP6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 TCEAL8Q8IYN2 117 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 TP53I13Q8NBR0 393 aaPredicted RBP6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 GCDHQ92947 438 aaPredicted RBP6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 GOLGA6AQ9NYA3 693 aa6.33□□□□□ -1.4
PRPF40A-208ENST00000472760 A0A1W2PR48 441 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 MROH6A6NGR9 719 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 GAAP10253 952 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 ATF3P18847 181 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 AKAP5P24588 427 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 SLURP1P55000 103 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 RRP12Q5JTH9 1297 aaKnown RBP6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 C14orf80Q86SX3 495 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 UNC5BQ8IZJ1 945 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 NRG4Q8WWG1 115 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 RIN2Q8WYP3 895 aaPredicted RBP6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 COA7Q96BR5 231 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 LRGUKQ96M69 825 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 KIAA1683Q9H0B3 1180 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 OR10A2Q9H208 303 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 RBM12Q9NTZ6 932 aaKnown RBP6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 RBM8AQ9Y5S9 174 aaKnown RBP6.32□□□□□ -1.4
PRPF40A-208ENST00000472760 PRPF3O43395 683 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-208ENST00000472760 AKR1B10O60218 316 aa6.31□□□□□ -1.4
PRPF40A-208ENST00000472760 PRAMEF4O60810 478 aa6.31□□□□□ -1.4
PRPF40A-208ENST00000472760 C8AP07357 584 aa6.31□□□□□ -1.4
PRPF40A-208ENST00000472760 LTA4HP09960 611 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-208ENST00000472760 MCAMP43121 646 aa6.31□□□□□ -1.4
PRPF40A-208ENST00000472760 KCNC1P48547 511 aa6.31□□□□□ -1.4
PRPF40A-208ENST00000472760 MEF2AQ02078 507 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms