RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PTENP60484 403 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 RBL2Q08999 1139 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 FAM26DQ5JW98 314 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 ZNF618Q5T7W0 954 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 NT5DC1Q5TFE4 455 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 ZNF658Q5TYW1 1059 aaPredicted RBP18.56■□□□□ 0.56
CCM2-205ENST00000472223 ZNF720Q7Z2F6 126 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 SPATA20Q8TB22 786 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 BSNDQ8WZ55 320 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 DHX38Q92620 1227 aaKnown RBP18.56■□□□□ 0.56
CCM2-205ENST00000472223 HVCN1Q96D96 273 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 ZNF668Q96K58 619 aaPredicted RBP18.56■□□□□ 0.56
CCM2-205ENST00000472223 CTAGE1Q96RT6 745 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 TMEM134Q9H6X4 195 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 SLC39A2Q9NP94 309 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 PRMT7Q9NVM4 692 aaPredicted RBP18.56■□□□□ 0.56
CCM2-205ENST00000472223 DACH1Q9UI36 760 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 SQORQ9Y6N5 450 aa18.56■□□□□ 0.56
CCM2-205ENST00000472223 DNAH12Q6ZR08 3092 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 DENND3A2RUS2 1198 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 BIN1O00499 593 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 GPR182O15218 404 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 RPS6KA5O75582 802 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 NMT1P30419 496 aaKnown RBP18.55■□□□□ 0.56
CCM2-205ENST00000472223 TRIM71Q2Q1W2 868 aaKnown RBP18.55■□□□□ 0.56
CCM2-205ENST00000472223 SYCP3Q8IZU3 236 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 BICD1Q96G01 975 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 NOC4LQ9BVI4 516 aaKnown RBP18.55■□□□□ 0.56
CCM2-205ENST00000472223 PPP1R12CQ9BZL4 782 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 ADAMTS10Q9H324 1103 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 ST6GALNAC4Q9H4F1 302 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 TMEM206Q9H813 350 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 MAN1B1Q9UKM7 699 aa18.55■□□□□ 0.56
CCM2-205ENST00000472223 EIF3DO15371 548 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCM2-205ENST00000472223 CHRNA1P02708 482 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 DARSP14868 501 aaKnown RBP18.54■□□□□ 0.56
CCM2-205ENST00000472223 CDCA2Q69YH5 1023 aaPredicted RBP18.54■□□□□ 0.56
CCM2-205ENST00000472223 ISM2Q6H9L7 571 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 CATSPER4Q7RTX7 472 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 APBB1IPQ7Z5R6 666 aaPredicted RBP18.54■□□□□ 0.56
CCM2-205ENST00000472223 IFNLR1Q8IU57 520 aaPredicted RBP18.54■□□□□ 0.56
CCM2-205ENST00000472223 C7orf61Q8IZ16 206 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 MYOCDQ8IZQ8 938 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 TMEM199Q8N511 208 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 TMEM161BQ8NDZ6 487 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 WNT8BQ93098 351 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 ACCSQ96QU6 501 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 TBX21Q9UL17 535 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 NR2E3Q9Y5X4 410 aa18.54■□□□□ 0.56
CCM2-205ENST00000472223 UBE4BO95155 1302 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 KIAA0355O15063 1070 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 TIMP1P01033 207 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 IQCF3P0C7M6 154 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 RFC2P35250 354 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 GTF2BQ00403 316 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 MGAT3Q09327 533 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 PAK2Q13177 524 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 PRPF4BQ13523 1007 aaKnown RBP18.53■□□□□ 0.56
CCM2-205ENST00000472223 FAM43BQ6ZT52 329 aaPredicted RBP18.53■□□□□ 0.56
CCM2-205ENST00000472223 HPS3Q969F9 1004 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 PRIMPOLQ96LW4 560 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 KIFC3Q9BVG8 833 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 IFT122Q9HBG6 1241 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 ARHGAP28Q9P2N2 729 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 TBX20Q9UMR3 447 aa18.53■□□□□ 0.56
CCM2-205ENST00000472223 PRKCBP05771 671 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 CCDC192P0DO97 292 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 CCL23P55773 120 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 NLRP12P59046 1061 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 EHHADHQ08426 723 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 NFX1Q12986 1120 aaKnown RBP18.52■□□□□ 0.56
CCM2-205ENST00000472223 STK4Q13043 487 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 MORC3Q14149 939 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 RBM43Q6ZSC3 357 aaKnown RBP18.52■□□□□ 0.56
CCM2-205ENST00000472223 TSHZ1Q6ZSZ6 1077 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 RPUSD2Q8IZ73 545 aaKnown RBP18.52■□□□□ 0.56
CCM2-205ENST00000472223 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 MRPL4Q9BYD3 311 aaKnown RBP18.52■□□□□ 0.56
CCM2-205ENST00000472223 CDHR5Q9HBB8 845 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 ANO10Q9NW15 660 aa18.52■□□□□ 0.56
CCM2-205ENST00000472223 ACKR2O00590 384 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 PSMA7O14818 248 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 MYBP10242 640 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 GHRP10912 638 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 ZSCAN20P17040 1043 aaPredicted RBP18.51■□□□□ 0.55
CCM2-205ENST00000472223 AXLP30530 894 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 CYP2C18P33260 490 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 MATR3P43243 847 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCM2-205ENST00000472223 LIG4P49917 911 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 MBTD1Q05BQ5 628 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 STX1AQ16623 288 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 ZC2HC1CQ53FD0 456 aaPredicted RBP18.51■□□□□ 0.55
CCM2-205ENST00000472223 FBXO47Q5MNV8 452 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 ZNF507Q8TCN5 953 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 SEPT8Q92599 483 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 LBHD1Q9BQE6 289 aaPredicted RBP18.51■□□□□ 0.55
CCM2-205ENST00000472223 NAT10Q9H0A0 1025 aaKnown RBP18.51■□□□□ 0.55
CCM2-205ENST00000472223 GDAQ9Y2T3 454 aa18.51■□□□□ 0.55
CCM2-205ENST00000472223 SYCE3A1L190 88 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms