RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 VAMP7P51809 220 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 ITIH3Q06033 890 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 H2AFVQ71UI9 128 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 TEX2Q8IWB9 1127 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 ZNF280CQ8ND82 737 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 NEK9Q8TD19 979 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 ZNF526Q8TF50 670 aaPredicted RBP16.33■□□□□ 0.21
UBXN11-213ENST00000472155 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.21
UBXN11-213ENST00000472155 TBC1D22BQ9NU19 505 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.21
UBXN11-213ENST00000472155 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.21
UBXN11-213ENST00000472155 CENPFP49454 3210 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 FERP16591 822 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 RPS6KA1Q15418 735 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 STXBP4Q6ZWJ1 553 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 VSIG10LQ86VR7 867 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 METTL13Q8N6R0 699 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 NLGN2Q8NFZ4 835 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 CCDC127Q96BQ5 260 aa16.33■□□□□ 0.2
UBXN11-213ENST00000472155 CEP104O60308 925 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 RNF40O75150 1001 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 TUBBP07437 444 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 ITGA4P13612 1032 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 PSMC5P62195 406 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 GUCY2DQ02846 1103 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 PPP2R5AQ15172 486 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 C4orf19Q8IY42 314 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 IFT81Q8WYA0 676 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 SEMA4DQ92854 862 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 ACCSQ96QU6 501 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 THAP2Q9H0W7 228 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 EPB41L5Q9HCM4 733 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 NFU1Q9UMS0 254 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 FZD9O00144 591 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 EIF3JO75822 258 aaKnown RBP16.32■□□□□ 0.2
UBXN11-213ENST00000472155 HEXIM1O94992 359 aaKnown RBP16.32■□□□□ 0.2
UBXN11-213ENST00000472155 NPTX2P47972 431 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 HIRAP54198 1017 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-213ENST00000472155 GTF2BQ00403 316 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 SLC39A4Q6P5W5 647 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 DAAM2Q86T65 1068 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 TXLNBQ8N3L3 684 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 USP38Q8NB14 1042 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 SLC35G2Q8TBE7 412 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 COG5Q9UP83 839 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 WDR64B1ANS9 1081 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 RAD51CO43502 376 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 BUB1BO60566 1050 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-213ENST00000472155 SP2Q02086 613 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 MAP2K1Q02750 393 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-213ENST00000472155 SWSAP1Q6NVH7 229 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 CCDC60Q8IWA6 550 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-213ENST00000472155 XXYLT1Q8NBI6 393 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 TMEM161BQ8NDZ6 487 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 TMEM117Q9H0C3 514 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 R3HDMLQ9H3Y0 253 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 NR2E1Q9Y466 385 aa16.32■□□□□ 0.2
UBXN11-213ENST00000472155 LOXHD1Q8IVV2 1947 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 BTNL10A8MVZ5 291 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 STBD1O95210 358 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 LYPLA2O95372 231 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 KCNA2P16389 499 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
UBXN11-213ENST00000472155 USP8P40818 1118 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 R3HDM1Q15032 1099 aaKnown RBP16.31■□□□□ 0.2
UBXN11-213ENST00000472155 CPNE8Q86YQ8 564 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 CASKIN2Q8WXE0 1202 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 A1CFQ9NQ94 594 aaKnown RBP16.31■□□□□ 0.2
UBXN11-213ENST00000472155 GGA3Q9NZ52 723 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 A0A0U1RQG5 324 aaPredicted RBP16.31■□□□□ 0.2
UBXN11-213ENST00000472155 KRT13P13646 458 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 COPB2P35606 906 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 NCKAP1LP55160 1127 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 MAP9Q49MG5 647 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 EPC2Q52LR7 807 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 TAF3Q5VWG9 929 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
UBXN11-213ENST00000472155 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 STXBP5LQ9Y2K9 1186 aa16.31■□□□□ 0.2
UBXN11-213ENST00000472155 SSC5DA1L4H1 1573 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 DENND3A2RUS2 1198 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 ATMINO43313 823 aaPredicted RBP16.3■□□□□ 0.2
UBXN11-213ENST00000472155 SGPL1O95470 568 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 DSG3P32926 999 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 AARSP49588 968 aaKnown RBP eCLIP16.3■□□□□ 0.2
UBXN11-213ENST00000472155 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 AADACL2Q6P093 401 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 PEX26Q7Z412 305 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 NT5DC3Q86UY8 548 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 DDX42Q86XP3 938 aaKnown RBP eCLIP16.3■□□□□ 0.2
UBXN11-213ENST00000472155 CEP170P1Q96L14 293 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms