RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 BMP2KQ9NSY1 1161 aaPredicted RBP25.2■■□□□ 1.62
C9orf3-213ENST00000471978 BTBD18B2RXH4 712 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 SRGAP2CP0DJJ0 459 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 TRIM29Q14134 588 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 LONRF3Q496Y0 759 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 TPH2Q8IWU9 490 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 LPPQ93052 612 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 NGRNQ9NPE2 291 aaKnown RBP25.19■■□□□ 1.62
C9orf3-213ENST00000471978 FAM105AQ9NUU6 356 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 HCN4Q9Y3Q4 1203 aa25.19■■□□□ 1.62
C9orf3-213ENST00000471978 ZBTB39O15060 712 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 SEC24BO95487 1268 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 ALDH7A1P49419 539 aaKnown RBP25.18■■□□□ 1.62
C9orf3-213ENST00000471978 LAMTOR4Q0VGL1 99 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 EMC2Q15006 297 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 CALCRLQ16602 461 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 XKR9Q5GH70 373 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 TMC7Q7Z402 723 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 DIS3L2Q8IYB7 885 aaKnown RBP25.18■■□□□ 1.62
C9orf3-213ENST00000471978 SLC39A11Q8N1S5 342 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 RSPH1Q8WYR4 309 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 PCDHA12Q9UN75 941 aa25.18■■□□□ 1.62
C9orf3-213ENST00000471978 HIDE1A8MVS5 230 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 PRR33A8MZF0 331 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 GAS2O43903 313 aaKnown RBP25.17■■□□□ 1.62
C9orf3-213ENST00000471978 SLITRK3O94933 977 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 RAB27AP51159 221 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 BCAR1P56945 870 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 GLB1LQ6UWU2 654 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 SRGAP1Q7Z6B7 1085 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 TCP11Q8WWU5 503 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 EIF2AK1Q9BQI3 630 aaKnown RBP25.17■■□□□ 1.62
C9orf3-213ENST00000471978 AGPAT5Q9NUQ2 364 aa25.17■■□□□ 1.62
C9orf3-213ENST00000471978 USP15Q9Y4E8 981 aaPredicted RBP25.17■■□□□ 1.62
C9orf3-213ENST00000471978 NT5C1B-RDH14C9J2C7 533 aa25.16■■□□□ 1.62
C9orf3-213ENST00000471978 ZNF623O75123 536 aa25.16■■□□□ 1.62
C9orf3-213ENST00000471978 SRGAP2BP0DMP2 458 aa25.16■■□□□ 1.62
C9orf3-213ENST00000471978 MINDY3Q9H8M7 445 aa25.16■■□□□ 1.62
C9orf3-213ENST00000471978 MEIS3P2A8K0S8 358 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 ASAP2O43150 1006 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 NEMFO60524 1076 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 ZC3H11AO75152 810 aaKnown RBP eCLIP25.15■■□□□ 1.62
C9orf3-213ENST00000471978 KCNC3Q14003 757 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 NOMO2Q5JPE7 1267 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 LLGL2Q6P1M3 1020 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 TMEM184AQ6ZMB5 413 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 FERMT3Q86UX7 667 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 RNF135Q8IUD6 432 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 RNF149Q8NC42 400 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 PGBD4Q96DM1 585 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 MTRQ99707 1265 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 HSD17B14Q9BPX1 270 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 TTC12Q9H892 705 aaPredicted RBP25.15■■□□□ 1.62
C9orf3-213ENST00000471978 INPP5FQ9Y2H2 1132 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 PCDHB2Q9Y5E7 798 aa25.15■■□□□ 1.62
C9orf3-213ENST00000471978 WNT7AO00755 349 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 OFD1O75665 1012 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 TECP42680 631 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 TXKP42681 527 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 ST3GAL1Q11201 340 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 SMC1AQ14683 1233 aaKnown RBP25.14■■□□□ 1.62
C9orf3-213ENST00000471978 TMEM169Q96HH4 297 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 TBC1D13Q9NVG8 400 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 MUTYHQ9UIF7 546 aa25.14■■□□□ 1.62
C9orf3-213ENST00000471978 RNASELQ05823 741 aaKnown RBP25.13■■□□□ 1.61
C9orf3-213ENST00000471978 MRPL43Q8N983 215 aaKnown RBP25.13■■□□□ 1.61
C9orf3-213ENST00000471978 FAM122AQ96E09 287 aa25.13■■□□□ 1.61
C9orf3-213ENST00000471978 CARNS1A5YM72 827 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 LYPLA2O95372 231 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 HOXA11P31270 313 aaPredicted RBP25.12■■□□□ 1.61
C9orf3-213ENST00000471978 CA8P35219 290 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 PLA2G5P39877 138 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 HERC4Q5GLZ8 1057 aaPredicted RBP25.12■■□□□ 1.61
C9orf3-213ENST00000471978 ANKRD54Q6NXT1 300 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 SUSD6Q92537 303 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 MTMR9Q96QG7 549 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 PHF7Q9BWX1 381 aaPredicted RBP25.12■■□□□ 1.61
C9orf3-213ENST00000471978 NRDE2Q9H7Z3 1164 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 XPNPEP1Q9NQW7 623 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 ANKEF1Q9NU02 776 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 LIMCH1Q9UPQ0 1083 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 ARID2Q68CP9 1835 aa25.12■■□□□ 1.61
C9orf3-213ENST00000471978 C2orf71A6NGG8 1288 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 LOC730098B7Z3J9 87 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 GUCY1B3Q02153 619 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 MXD4Q14582 209 aaPredicted RBP25.11■■□□□ 1.61
C9orf3-213ENST00000471978 BMS1Q14692 1282 aaKnown RBP25.11■■□□□ 1.61
C9orf3-213ENST00000471978 SAFBQ15424 915 aaKnown RBP eCLIP25.11■■□□□ 1.61
C9orf3-213ENST00000471978 AGMOQ6ZNB7 445 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 MRPL10Q7Z7H8 261 aaKnown RBP25.11■■□□□ 1.61
C9orf3-213ENST00000471978 TMEM173Q86WV6 379 aaPredicted RBP25.11■■□□□ 1.61
C9orf3-213ENST00000471978 VPS52Q8N1B4 723 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 URGCPQ8TCY9 931 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 CCDC43Q96MW1 224 aaKnown RBP25.11■■□□□ 1.61
C9orf3-213ENST00000471978 GBP3Q9H0R5 595 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 S1PR5Q9H228 398 aa25.11■■□□□ 1.61
C9orf3-213ENST00000471978 ARIH1Q9Y4X5 557 aaPredicted RBP25.11■■□□□ 1.61
C9orf3-213ENST00000471978 ERLIN2O94905 339 aa25.1■■□□□ 1.61
C9orf3-213ENST00000471978 CXCL14O95715 111 aa25.1■■□□□ 1.61
C9orf3-213ENST00000471978 GALTP07902 379 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms