RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 TFF2Q03403 129 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 CAPSQ13938 189 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 PDIA5Q14554 519 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 KLHL23Q8NBE8 558 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 MCPH1Q8NEM0 835 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 CLP1Q92989 425 aaKnown RBP16.43■□□□□ 0.22
SSR4-208ENST00000471880 PLIN2Q99541 437 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 POLD4Q9HCU8 107 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 TYW1Q9NV66 732 aaKnown RBP16.43■□□□□ 0.22
SSR4-208ENST00000471880 DBR1Q9UK59 544 aaKnown RBP16.43■□□□□ 0.22
SSR4-208ENST00000471880 XIRP2A4UGR9 3374 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 A0A0U1RQF3 1178 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 GLRA2P23416 452 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 PRPHP41219 470 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 MRPS5P82675 430 aaKnown RBP16.42■□□□□ 0.22
SSR4-208ENST00000471880 ECM1Q16610 540 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 TIGD5Q53EQ6 642 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 BRAPQ7Z569 592 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 ZBTB8OSQ8IWT0 167 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 IGSF22Q8N9C0 903 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 MICAL1Q8TDZ2 1067 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 HLA-CQ95604 372 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 CPB2Q96IY4 423 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 PLVAPQ9BX97 442 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
SSR4-208ENST00000471880 FAM105AQ9NUU6 356 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 DNM3Q9UQ16 869 aa16.42■□□□□ 0.22
SSR4-208ENST00000471880 E9PMD0 336 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 C5orf67F2Z3F1 127 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 EOMESO95936 686 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 CA8P35219 290 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 ARL2P36404 184 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 RAB27AP51159 221 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 PTENP60484 403 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 ATP2C1P98194 919 aaPredicted RBP16.41■□□□□ 0.22
SSR4-208ENST00000471880 RNASELQ05823 741 aaKnown RBP16.41■□□□□ 0.22
SSR4-208ENST00000471880 IL17AQ16552 155 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 TCEAL5Q5H9L2 206 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 LRRC43Q8N309 656 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 DEPTORQ8TB45 409 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 ATXN2LQ8WWM7 1075 aaKnown RBP16.41■□□□□ 0.22
SSR4-208ENST00000471880 PGBD4Q96DM1 585 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 CASD1Q96PB1 797 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 APOL6Q9BWW8 343 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 IGFLR1Q9H665 355 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 PLAGL2Q9UPG8 496 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 PCDHB2Q9Y5E7 798 aa16.41■□□□□ 0.22
SSR4-208ENST00000471880 ITGB1P05556 798 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 LAG3P18627 525 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 SYT1P21579 422 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 MUTP22033 750 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 PBX3P40426 434 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 CEBPZQ03701 1054 aaKnown RBP16.4■□□□□ 0.22
SSR4-208ENST00000471880 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 NOTUMQ6P988 496 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 GLB1LQ6UWU2 654 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 COLGALT1Q8NBJ5 622 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 SPRYD3Q8NCJ5 442 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 URGCPQ8TCY9 931 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 POF1BQ8WVV4 589 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 IFT74Q96LB3 600 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
SSR4-208ENST00000471880 RNF19AQ9NV58 838 aa16.4■□□□□ 0.22
SSR4-208ENST00000471880 TSPAN1O60635 241 aa16.39■□□□□ 0.21
SSR4-208ENST00000471880 ZC3H11AO75152 810 aaKnown RBP eCLIP16.39■□□□□ 0.21
SSR4-208ENST00000471880 ATF7P17544 494 aaPredicted RBP16.39■□□□□ 0.21
SSR4-208ENST00000471880 CYP11B2P19099 503 aa16.39■□□□□ 0.21
SSR4-208ENST00000471880 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
SSR4-208ENST00000471880 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
SSR4-208ENST00000471880 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
SSR4-208ENST00000471880 CDR2LQ86X02 465 aaPredicted RBP16.39■□□□□ 0.21
SSR4-208ENST00000471880 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
SSR4-208ENST00000471880 P2RX5Q93086 422 aa16.39■□□□□ 0.21
SSR4-208ENST00000471880 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
SSR4-208ENST00000471880 ZNF558Q96NG5 402 aa16.39■□□□□ 0.21
SSR4-208ENST00000471880 ASB2Q96Q27 587 aa16.39■□□□□ 0.21
SSR4-208ENST00000471880 MRPL9Q9BYD2 267 aaKnown RBP16.39■□□□□ 0.21
SSR4-208ENST00000471880 COG5Q9UP83 839 aa16.39■□□□□ 0.21
SSR4-208ENST00000471880 MEIS3P2A8K0S8 358 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 B4GALT5O43286 388 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 FGF18O76093 207 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 ITGA4P13612 1032 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 KCNA5P22460 613 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 UBA7P41226 1012 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 KCNQ1P51787 676 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 RAD51AP2Q09MP3 1159 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 PPP2R5AQ15172 486 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 FAM173BQ6P4H8 233 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 KCNT2Q6UVM3 1135 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 LRRC55Q6ZSA7 311 aa16.38■□□□□ 0.21
SSR4-208ENST00000471880 ZNF598Q86UK7 904 aaKnown RBP16.38■□□□□ 0.21
SSR4-208ENST00000471880 CABP7Q86V35 215 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms