RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 DEFB103AP81534 67 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 DHX8Q14562 1220 aaKnown RBP16.7■□□□□ 0.26
SNX13-205ENST00000471744 DSC3Q14574 896 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 NAALADL2Q58DX5 795 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNX13-205ENST00000471744 SLC24A5Q71RS6 500 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 PDILTQ8N807 584 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 LRRC15Q8TF66 581 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 TOP1MTQ969P6 601 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 PRIMPOLQ96LW4 560 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 ZBED2Q9BTP6 218 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 AGPAT5Q9NUQ2 364 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 PRMT7Q9NVM4 692 aaPredicted RBP16.7■□□□□ 0.26
SNX13-205ENST00000471744 LARSQ9P2J5 1176 aaKnown RBP16.7■□□□□ 0.26
SNX13-205ENST00000471744 PCDHA11Q9Y5I1 949 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 TMEM265A0A087WTH1 108 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 A0A1W2PQ27 194 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 A0A1W2PQ64 194 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 A0A1W2PQD8 194 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 H0YCG3 227 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 TBCAO75347 108 aaKnown RBP16.69■□□□□ 0.26
SNX13-205ENST00000471744 CSDE1O75534 798 aaKnown RBP16.69■□□□□ 0.26
SNX13-205ENST00000471744 GJB5O95377 273 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 SKIP12755 728 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 PLS3P13797 630 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
SNX13-205ENST00000471744 AMPD3Q01432 767 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 MBTD1Q05BQ5 628 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 MAPK7Q13164 816 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 MAPK6Q16659 721 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 FAM187BQ17R55 369 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 ARSHQ5FYA8 562 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 NPAS4Q8IUM7 802 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 DAW1Q8N136 415 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 SPIRE2Q8WWL2 714 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 LINC01599Q8WXQ3 324 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 BSNDQ8WZ55 320 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 CCDC51Q96ER9 411 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 PANK2Q9BZ23 570 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 MINDY3Q9H8M7 445 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 USP25Q9UHP3 1055 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 KCNH3Q9ULD8 1083 aa16.69■□□□□ 0.26
SNX13-205ENST00000471744 PIN4Q9Y237 131 aaKnown RBP16.69■□□□□ 0.26
SNX13-205ENST00000471744 A0A087X0B3 334 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 CCDC169A6NNP5 214 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 C9IYK1 514 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 TLL1O43897 1013 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 MGEA5O60502 916 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 FAM13AO94988 1023 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 FGFR4P22455 802 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 ABCD1P33897 745 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 NPTX2P47972 431 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 RAB27AP51159 221 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 PEX3P56589 373 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 E2F4Q16254 413 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 TWF2Q6IBS0 349 aaKnown RBP16.68■□□□□ 0.26
SNX13-205ENST00000471744 FAM109BQ6ICB4 259 aaPredicted RBP16.68■□□□□ 0.26
SNX13-205ENST00000471744 RTN4RL1Q86UN2 441 aaPredicted RBP16.68■□□□□ 0.26
SNX13-205ENST00000471744 SLC17A8Q8NDX2 589 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 DHX58Q96C10 678 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 CHAMP1Q96JM3 812 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 RAD9AQ99638 391 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 REEP2Q9BRK0 252 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 NTPCRQ9BSD7 190 aaKnown RBP16.68■□□□□ 0.26
SNX13-205ENST00000471744 PBX4Q9BYU1 374 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 ELAC1Q9H777 363 aaKnown RBP16.68■□□□□ 0.26
SNX13-205ENST00000471744 PARVGQ9HBI0 331 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 KMT5AQ9NQR1 393 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 LRFN2Q9ULH4 789 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 INSL6Q9Y581 213 aa16.68■□□□□ 0.26
SNX13-205ENST00000471744 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 GRXCR1A8MXD5 290 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 POLR2DO15514 142 aaKnown RBP16.67■□□□□ 0.26
SNX13-205ENST00000471744 DNAJB2P25686 324 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 ZNF131P52739 623 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 FAM189BP81408 668 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 GIT2Q14161 759 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 NOTUMQ6P988 496 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 CEP57L1Q8IYX8 460 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 RSPH1Q8WYR4 309 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 DDX12PQ92771 950 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 FZD8Q9H461 694 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 TMEM134Q9H6X4 195 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 KBTBD4Q9NVX7 518 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 ARHGAP28Q9P2N2 729 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 PCDHB7Q9Y5E2 793 aa16.67■□□□□ 0.26
SNX13-205ENST00000471744 COL4A6Q14031 1691 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 A0A0U1RQF3 1178 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 FAM237AA0A1B0GTK4 181 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 K7ERI5 159 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 SOX1O00570 391 aaPredicted RBP16.66■□□□□ 0.26
SNX13-205ENST00000471744 HOXA2O43364 376 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 TSPAN1O60635 241 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 UPP2O95045 317 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 EOMESO95936 686 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 PRKCBP05771 671 aa16.66■□□□□ 0.26
SNX13-205ENST00000471744 PFKFB1P16118 471 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms