RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ZNF197O14709 1029 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 LZTS3O60299 673 aaPredicted RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 MGEA5O60502 916 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 TUBB4AP04350 444 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CDH18Q13634 790 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 SV2CQ496J9 727 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 MFN1Q8IWA4 741 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 SEPT1Q8WYJ6 367 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 FAF2Q96CS3 445 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 L3MBTL3Q96JM7 780 aaPredicted RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 SLITRK1Q96PX8 696 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 TEX12Q9BXU0 123 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 PLEKHA5Q9HAU0 1116 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 ERAP1Q9NZ08 941 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 TTI1O43156 1089 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 NPTXRO95502 500 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 HSPA8P11142 646 aaKnown RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 SRRM1Q8IYB3 904 aaKnown RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 FAM151AQ8WW52 585 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 TMEM47Q9BQJ4 181 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 FBXO10Q9UK96 956 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 ITIH6Q6UXX5 1313 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CD4P01730 458 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 ARHGDIAP52565 204 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 ANKS6Q68DC2 871 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 TMEM270Q6UE05 265 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CFAP61Q8NHU2 1237 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CCHCR1Q8TD31 782 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 RUNDC3BQ96NL0 473 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CAPN10Q9HC96 672 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 NCKAP1Q9Y2A7 1128 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 RIMS1Q86UR5 1692 aaKnown RBP9.15□□□□□ -0.94
CD47-204ENST00000471694 PIK3R2O00459 728 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 RALBP11234 206 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 EFNA5P52803 228 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 USP50Q70EL3 339 aaPredicted RBP9.15□□□□□ -0.94
CD47-204ENST00000471694 KDELC2Q7Z4H8 507 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 NEK9Q8TD19 979 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 PPP1R13BQ96KQ4 1090 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 FOXP1Q9H334 677 aaPredicted RBP9.15□□□□□ -0.94
CD47-204ENST00000471694 CAMSAP1Q5T5Y3 1602 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 RGS16O15492 202 aaPredicted RBP9.15□□□□□ -0.94
CD47-204ENST00000471694 PFKFB2O60825 505 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 HSPA6P17066 643 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 AVPR1AP37288 418 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SPDYE7PQ495Y7 208 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SGO2Q562F6 1265 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SSH3Q8TE77 659 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SOCS4Q8WXH5 440 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SPDL1Q96EA4 605 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.15□□□□□ -0.94
CD47-204ENST00000471694 LXNQ9BS40 222 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 CPVLQ9H3G5 476 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 UNC45AQ9H3U1 944 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 TEKT2Q9UIF3 430 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 HEY1Q9Y5J3 304 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 PLD1Q13393 1074 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SLC9A5Q14940 896 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SLMAPQ14BN4 828 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 PLCL1Q15111 1095 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 LLGL1Q15334 1064 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 KIF19Q2TAC6 998 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 CACNA2D3Q8IZS8 1091 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 XPNPEP3Q9NQH7 507 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 RBAKQ9NYW8 714 aaPredicted RBP9.15□□□□□ -0.94
CD47-204ENST00000471694 SNAP23O00161 211 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 PDGFRBP09619 1106 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 ERVK-10P10266 1014 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 ODC1P11926 461 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 PRAMEP78395 509 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 C11orf96Q7Z7L8 435 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 TTC39CQ8N584 583 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 VMP1Q96GC9 406 aa9.15□□□□□ -0.94
CD47-204ENST00000471694 SHROOM2Q13796 1616 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 ARHGAP31Q2M1Z3 1444 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 PRPF3O43395 683 aaKnown RBP9.15□□□□□ -0.95
CD47-204ENST00000471694 KPNA6O60684 536 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 XYLBO75191 536 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 SDC4P31431 198 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 ME3Q16798 604 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 PPM1LQ5SGD2 360 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 CDC42EP5Q6NZY7 148 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 NOTUMQ6P988 496 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 C7orf61Q8IZ16 206 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 UHMK1Q8TAS1 419 aaKnown RBP9.15□□□□□ -0.95
CD47-204ENST00000471694 EPAS1Q99814 870 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 AXIN2Q9Y2T1 843 aa9.15□□□□□ -0.95
CD47-204ENST00000471694 CTNNB1P35222 781 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 MCAMP43121 646 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 PPP3CCP48454 512 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 SP3Q02447 781 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 QRICH1Q2TAL8 776 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 TAF1BQ53T94 588 aaPredicted RBP9.14□□□□□ -0.95
CD47-204ENST00000471694 MARCH10Q8NA82 808 aaPredicted RBP9.14□□□□□ -0.95
CD47-204ENST00000471694 MIPOL1Q8TD10 442 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 TMEM143Q96AN5 459 aa9.14□□□□□ -0.95
CD47-204ENST00000471694 CHAMP1Q96JM3 812 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms