RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 FAM111BQ6SJ93 734 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 USP51Q70EK9 711 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 GAREM2Q75VX8 874 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 RSAD2Q8WXG1 361 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 ZNF503Q96F45 646 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 SOX7Q9BT81 388 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 SRRDQ9UH36 339 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 KCNG1Q9UIX4 513 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 NRP2O60462 931 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 PCDH8O95206 1070 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 HNRNPLP14866 589 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC39-202ENST00000471307 MFSD5Q6N075 450 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 C1orf210Q8IVY1 113 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 LEO1Q8WVC0 666 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-202ENST00000471307 EXTL1Q92935 676 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 MIEF2Q96C03 454 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 UIMC1Q96RL1 719 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 TCF25Q9BQ70 676 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 SLKQ9H2G2 1235 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-202ENST00000471307 ZNF703Q9H7S9 590 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-202ENST00000471307 RCAN3Q9UKA8 241 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 SH3BP1Q9Y3L3 701 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 NUMBLQ9Y6R0 609 aa7.89□□□□□ -1.15
CCDC39-202ENST00000471307 CYR61O00622 381 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 NRP1O14786 923 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 BPIP17213 487 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 XPAP23025 273 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-202ENST00000471307 DDB1Q16531 1140 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 ZBTB41Q5SVQ8 909 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 CXorf67Q86X51 503 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-202ENST00000471307 Q8N1X5 172 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 SLC5A5Q92911 643 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 USP7Q93009 1102 aa7.88□□□□□ -1.15
CCDC39-202ENST00000471307 UBE2QL1A1L167 161 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 ZEB2O60315 1214 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 RAB11FIP3O75154 756 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 SEC24DO94855 1032 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-202ENST00000471307 GAAP10253 952 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 ACVRL1P37023 503 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 ACAP1Q15027 740 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 SPTY2D1Q68D10 685 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-202ENST00000471307 RNF180Q86T96 592 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 RASSF3Q86WH2 238 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 CMTM4Q8IZR5 234 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 IL17DQ8TAD2 202 aa7.87□□□□□ -1.15
CCDC39-202ENST00000471307 AKAP8O43823 692 aaKnown RBP7.86□□□□□ -1.15
CCDC39-202ENST00000471307 KDM1AO60341 852 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 SPIDRQ14159 915 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 ATP13A4Q4VNC1 1196 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 BROXQ5VW32 411 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 THNSL2Q86YJ6 484 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 SLC16A11Q8NCK7 471 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 GAB3Q8WWW8 586 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 TTC1Q99614 292 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 IFT22Q9H7X7 185 aa7.86□□□□□ -1.15
CCDC39-202ENST00000471307 PLSCR1O15162 318 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 ULK1O75385 1050 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 FSHBP01225 129 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 MANFP55145 182 aaKnown RBP7.85□□□□□ -1.15
CCDC39-202ENST00000471307 NPEPPSP55786 919 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 NRG3P56975 720 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 PTH1RQ03431 593 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 FKBP15Q5T1M5 1219 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 ZNF662Q6ZS27 426 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 DDX46Q7L014 1031 aaKnown RBP7.85□□□□□ -1.15
CCDC39-202ENST00000471307 TMPRSS6Q8IU80 811 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 ZNF341Q9BYN7 854 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 CAAP1Q9H8G2 361 aa7.85□□□□□ -1.15
CCDC39-202ENST00000471307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC39-202ENST00000471307 PRSS38A1L453 326 aa7.84□□□□□ -1.15
CCDC39-202ENST00000471307 IPO13O94829 963 aaKnown RBP7.84□□□□□ -1.15
CCDC39-202ENST00000471307 ELAVL1Q15717 326 aaKnown RBP7.84□□□□□ -1.15
CCDC39-202ENST00000471307 SDE2Q6IQ49 451 aa7.84□□□□□ -1.15
CCDC39-202ENST00000471307 GIMAP6Q6P9H5 292 aa7.84□□□□□ -1.15
CCDC39-202ENST00000471307 GLB1L2Q8IW92 636 aa7.84□□□□□ -1.15
CCDC39-202ENST00000471307 CACTINQ8WUQ7 758 aaKnown RBP7.84□□□□□ -1.15
CCDC39-202ENST00000471307 ARL8AQ96BM9 186 aa7.84□□□□□ -1.15
CCDC39-202ENST00000471307 APOBEC2Q9Y235 224 aaKnown RBP7.84□□□□□ -1.15
CCDC39-202ENST00000471307 NOC2LQ9Y3T9 749 aaKnown RBP7.84□□□□□ -1.15
CCDC39-202ENST00000471307 PPP2R3BQ9Y5P8 575 aa7.84□□□□□ -1.15
CCDC39-202ENST00000471307 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-202ENST00000471307 ALDH1A2O94788 518 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 LY86O95711 162 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 SOX5P35711 763 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 CD69Q07108 199 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 CRHR2Q13324 411 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 RRP1BQ14684 758 aaKnown RBP7.83□□□□□ -1.16
CCDC39-202ENST00000471307 LMBR1LQ6UX01 489 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 GSPT2Q8IYD1 628 aaKnown RBP7.83□□□□□ -1.16
CCDC39-202ENST00000471307 ZNF512Q96ME7 567 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-202ENST00000471307 PLEKHG4BQ96PX9 1271 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 TMX1Q9H3N1 280 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 PARPBPQ9NWS1 579 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 HECAQ9UBI9 543 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-202ENST00000471307 PRSS50Q9UI38 385 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 TMPRSS11EQ9UL52 423 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 USP18Q9UMW8 372 aa7.83□□□□□ -1.16
CCDC39-202ENST00000471307 MFAP3LO75121 409 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 CLSTN1O94985 981 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms