RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 KANSL1Q7Z3B3 1105 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 MRGPRGQ86SM5 289 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ADGRE4PQ86SQ3 457 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 CLEC14AQ86T13 490 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 KIF18BQ86Y91 864 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ZZZ3Q8IYH5 903 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 PPM1KQ8N3J5 372 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 ANKRD53Q8N9V6 530 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 SMC1BQ8NDV3 1235 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 LARP4BQ92615 738 aaKnown RBP2.12□□□□□ -2.07
UBXN4-207ENST00000471246 RABGGTAQ92696 567 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 EXTL1Q92935 676 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 GFM2Q969S9 779 aaKnown RBP2.12□□□□□ -2.07
UBXN4-207ENST00000471246 RPL10LQ96L21 214 aaKnown RBP2.12□□□□□ -2.07
UBXN4-207ENST00000471246 WDR92Q96MX6 357 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 GPHA2Q96T91 129 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 TARS2Q9BW92 718 aaKnown RBP2.12□□□□□ -2.07
UBXN4-207ENST00000471246 MTFR1LQ9H019 292 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 SLC6A15Q9H2J7 730 aa2.12□□□□□ -2.07
UBXN4-207ENST00000471246 A0A0A6YYJ9 748 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 ST20-MTHFSA0A0A6YYL1 179 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 ENPP3O14638 875 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 TGM5O43548 720 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 TOX4O94842 621 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 PCDH8O95206 1070 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 C1SP09871 688 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 VSIG10L2P0DP72 767 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 HNRNPLP14866 589 aaKnown RBP eCLIP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 POU3F3P20264 500 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 HIBADHP31937 336 aaKnown RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 ADCYAP1R1P41586 468 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 KPNA1P52294 538 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 SMAD3P84022 425 aaKnown RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 HHEXQ03014 270 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 CRHR2Q13324 411 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 LRRC32Q14392 662 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 PCBP1Q15365 356 aaKnown RBP eCLIP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 GAGE13Q4V321 117 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 DALRD3Q5D0E6 543 aaKnown RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 COLEC12Q5KU26 742 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 KRT40Q6A162 431 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 TIGD7Q6NT04 549 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 UNQ6494/PRO21346Q6UXR6 183 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 GAREM2Q75VX8 874 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 ZNF627Q7L945 461 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 KIAA0907Q7Z7F0 614 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 PASD1Q8IV76 773 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 C1orf210Q8IVY1 113 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 PLA2G15Q8NCC3 412 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 IL17DQ8TAD2 202 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 CACTINQ8WUQ7 758 aaKnown RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 FERMT2Q96AC1 680 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 GPR101Q96P66 508 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 NOL10Q9BSC4 688 aaKnown RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 MS4A5Q9H3V2 200 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 C14orf93Q9H972 538 aaKnown RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 IL23AQ9NPF7 189 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 IFT57Q9NWB7 429 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 USP36Q9P275 1121 aaKnown RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 HECAQ9UBI9 543 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-207ENST00000471246 RCAN3Q9UKA8 241 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 GIT1Q9Y2X7 761 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 SH3BP1Q9Y3L3 701 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 PCDHB6Q9Y5E3 794 aa2.11□□□□□ -2.07
UBXN4-207ENST00000471246 A0A0A6YYK5 440 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 KRTAP23-1A1A580 65 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 UBE2QL1A1L167 161 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 LCHNA4D1U4 455 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 GOLGA8BA8MQT2 603 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 GSG1L2A8MUP6 293 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 ELL2O00472 640 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 MAFGO15525 162 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 CYP27B1O15528 508 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 MTSS1O43312 755 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 PDE8AO60658 829 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 JUNP05412 331 aaKnown RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 PFKMP08237 780 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 CTGFP29279 349 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 LSSP48449 732 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 IL2P60568 153 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 PHC1P78364 1004 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 OCRLQ01968 901 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 RRP1BQ14684 758 aaKnown RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 SART3Q15020 963 aaKnown RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 ELAVL1Q15717 326 aaKnown RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 GPR158Q5T848 1215 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 SPTY2D1Q68D10 685 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 Q6ZRM9 215 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 ESPNLQ6ZVH7 1005 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 SGMS1Q86VZ5 419 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 UNC5BQ8IZJ1 945 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 AHI1Q8N157 1196 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 ANKRD35Q8N283 1001 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 MB21D1Q8N884 522 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 CDYL2Q8N8U2 506 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 ZNF610Q8N9Z0 462 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 PIK3C3Q8NEB9 887 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 OR2W6PQ8NHA6 318 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 MIEF2Q96C03 454 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms