RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 MTG1Q9BT17 334 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-207ENST00000471218 RUSC1Q9BVN2 902 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 NKX2-4Q9H2Z4 354 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 GDAQ9Y2T3 454 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 A0A087WWV3 80 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 A0A1W2PQC6 194 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 SLC16A3O15427 465 aaKnown RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 AP5Z1O43299 807 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 B4GALT4O60513 344 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 LGR5O75473 907 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 BAIAP3O94812 1187 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 HOXD8P13378 290 aaPredicted RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 SMPD1P17405 629 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 KCNJ6P48051 423 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 CCL23P55773 120 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 LAMC2Q13753 1193 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 SKIV2LQ15477 1246 aaKnown RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 ISM2Q6H9L7 571 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 TAPT1Q6NXT6 567 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 APTXQ7Z2E3 356 aaKnown RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 ZSCAN30Q86W11 494 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 CCDC112Q8NEF3 446 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 NTPCRQ9BSD7 190 aaKnown RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 AZI2Q9H6S1 392 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 TMEM206Q9H813 350 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 NRBP2Q9NSY0 501 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 LMCD1Q9NZU5 365 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 WRAP73Q9P2S5 460 aaPredicted RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
PTPRE-207ENST00000471218 NOD1Q9Y239 953 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 BDP1A6H8Y1 2624 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 LCTP09848 1927 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
PTPRE-207ENST00000471218 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 KCNJ18B7U540 433 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 ADCY6O43306 1168 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 CALUO43852 315 aaPredicted RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 EFCAB14O75071 495 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PPP1R37O75864 691 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 OATP04181 439 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 ATP1A3P13637 1013 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PLS3P13797 630 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PLA2G5P39877 138 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 SMTNP53814 917 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PRKCEQ02156 737 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 ADGRE1Q14246 886 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 KCNJ12Q14500 433 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 NR1I3Q14994 352 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PPP2R5AQ15172 486 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 KNOP1Q1ED39 458 aaKnown RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 HS2ST1Q7LGA3 356 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 FILIP1Q7Z7B0 1213 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 SFR1Q86XK3 245 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 SLC9A9Q8IVB4 645 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 FAM178BQ8IXR5 827 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 C12orf56Q8IXR9 622 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 SMYD4Q8IYR2 804 aaPredicted RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 BANK1Q8NDB2 785 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PPTC7Q8NI37 304 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PIGOQ8TEQ8 1089 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 SCFD1Q8WVM8 642 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 DUSP9Q99956 384 aaKnown RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 STRA6Q9BX79 667 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 TRPV6Q9H1D0 765 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 KCTD10Q9H3F6 313 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 MLXIPQ9HAP2 919 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 METTL14Q9HCE5 456 aaKnown RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 SLC39A2Q9NP94 309 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 ZNF302Q9NR11 478 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
PTPRE-207ENST00000471218 ZKSCAN5Q9Y2L8 839 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 HCN4Q9Y3Q4 1203 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 DAAM1Q9Y4D1 1078 aa10.06□□□□□ -0.8
PTPRE-207ENST00000471218 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 DDX39AO00148 427 aaKnown RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 NOP56O00567 594 aaKnown RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 BACH1O14867 736 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 MAPK13O15264 365 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 ZNF862O60290 1169 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 STBD1O95210 358 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 GGPS1O95749 300 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 GH1P01241 217 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 TPM1P09493 284 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 BMP1P13497 986 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 PBX1P40424 430 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 DNM2P50570 870 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 PURAQ00577 322 aaKnown RBP10.05□□□□□ -0.8
PTPRE-207ENST00000471218 MAPK7Q13164 816 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 KRT31Q15323 416 aa10.05□□□□□ -0.8
PTPRE-207ENST00000471218 ODR4Q5SWX8 454 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms