RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 GOLGA6L6A8MZA4 724 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 INO80B-WBP1J3KQ70 363 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 HNRNPDLO14979 420 aaKnown RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 EPB41P11171 864 aaKnown RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 CCL5P13501 91 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 NR2F2P24468 414 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 EEF1GP26641 437 aaKnown RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 MATR3P43243 847 aaKnown RBP eCLIP10.71□□□□□ -0.69
CCM2-204ENST00000470837 MTIF2P46199 727 aaKnown RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 LIG4P49917 911 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 IRX5P78411 483 aaPredicted RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 CAPSQ13938 189 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 NCAPHQ15003 741 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 HSP90AA4PQ58FG1 418 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 ARMCX5Q6P1M9 558 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 MAP4K3Q8IVH8 894 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 DOCK3Q8IZD9 2030 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 NME8Q8N427 588 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 BSNDQ8WZ55 320 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 DEFB118Q96PH6 123 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 KIFC3Q9BVG8 833 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 MRPL4Q9BYD3 311 aaKnown RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 SEZ6LQ9BYH1 1024 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 FGFBP2Q9BYJ0 223 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 GCOM2Q9BZD3 368 aaPredicted RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 INO80BQ9C086 356 aaPredicted RBP10.71□□□□□ -0.69
CCM2-204ENST00000470837 KCTD10Q9H3F6 313 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 TMEM134Q9H6X4 195 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 STARD7Q9NQZ5 370 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 ARHGAP28Q9P2N2 729 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 TRAF3IP3Q9Y228 551 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 LOXHD1Q8IVV2 1947 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 MBLAC1A4D2B0 266 aaPredicted RBP10.7□□□□□ -0.7
CCM2-204ENST00000470837 KCNJ18B7U540 433 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 DNM1LO00429 736 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 PPP1R37O75864 691 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 TFRCP02786 760 aaKnown RBP10.7□□□□□ -0.7
CCM2-204ENST00000470837 VTNP04004 478 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 NR3C1P04150 777 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 PMS1P54277 932 aaKnown RBP10.7□□□□□ -0.7
CCM2-204ENST00000470837 UBASH3AP57075 661 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 PTPN11Q06124 597 aaPredicted RBP10.7□□□□□ -0.7
CCM2-204ENST00000470837 POU5F1BQ06416 359 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 DRP2Q13474 957 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 ITGA7Q13683 1181 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 MYBPC2Q14324 1141 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 KCNJ12Q14500 433 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 CEP135Q66GS9 1140 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 LHX8Q68G74 356 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 SLFN12LQ6IEE8 588 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 APBB1IPQ7Z5R6 666 aaPredicted RBP10.7□□□□□ -0.7
CCM2-204ENST00000470837 ZNF410Q86VK4 478 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 KSR1Q8IVT5 923 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 FIZ1Q96SL8 496 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 METTL14Q9HCE5 456 aaKnown RBP10.7□□□□□ -0.7
CCM2-204ENST00000470837 AGPAT3Q9NRZ7 376 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 SAMSN1Q9NSI8 373 aaKnown RBP10.7□□□□□ -0.7
CCM2-204ENST00000470837 GTF2IRD1Q9UHL9 959 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 GINS2Q9Y248 185 aa10.7□□□□□ -0.7
CCM2-204ENST00000470837 A0A0U1RQG5 324 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 CLIC2O15247 247 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 SLC16A3O15427 465 aaKnown RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 TREHO43280 583 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 EXOC3O60645 756 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 ERLIN2O94905 339 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 ADCY5O95622 1261 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 PRKCBP05771 671 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 PRKCSHP14314 528 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 PSMC2P35998 433 aaKnown RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 CYP2J2P51589 502 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 NLRP11P59045 1033 aaKnown RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 FANCCQ00597 558 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 KCNA1Q09470 495 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 PTGISQ16647 500 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 TCP11X2Q5H9J9 407 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 MARCH8Q5T0T0 291 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 CDKAL1Q5VV42 579 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 CDCA2Q69YH5 1023 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 CCSAPQ6IQ19 270 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 SARM1Q6SZW1 724 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 FILIP1Q7Z7B0 1213 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 USP37Q86T82 979 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 SESTD1Q86VW0 696 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 KIAA0319LQ8IZA0 1049 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 POMGNT1Q8WZA1 660 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 ZBTB10Q96DT7 871 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 CNOT6LQ96LI5 555 aaKnown RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 PPP1R16BQ96T49 567 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 DUSP9Q99956 384 aaKnown RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 TCHPQ9BT92 498 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 NFKBIZQ9BYH8 718 aa10.69□□□□□ -0.7
CCM2-204ENST00000470837 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 PRMT7Q9NVM4 692 aaPredicted RBP10.69□□□□□ -0.7
CCM2-204ENST00000470837 DOCK5Q9H7D0 1870 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms