RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 USP40Q9NVE5 1235 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 HMG20BQ9P0W2 317 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 CLEC1BQ9P126 229 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 ACSL6Q9UKU0 697 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 A0A1W2PQ27 194 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 A0A1W2PQ64 194 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 A0A1W2PQC6 194 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 A0A1W2PQD8 194 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 C8AP07357 584 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 MVKQ03426 396 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 ZNF124Q15973 351 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 CEP85Q6P2H3 762 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 ARMC9Q7Z3E5 817 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 FBXO15Q8NCQ5 510 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 ZKSCAN4Q969J2 545 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 EAF2Q96CJ1 260 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 GNL3LQ9NVN8 582 aaKnown RBP8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-202ENST00000470661 OR14I1A6ND48 311 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 SMARCA5O60264 1052 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 TACR1P25103 407 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 NF2P35240 595 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 MCAMP43121 646 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 MECOMQ03112 1051 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 SUPT20HL1Q3ZLR7 823 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 SYDE1Q6ZW31 735 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 TBC1D22AQ8WUA7 517 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 WNK4Q96J92 1243 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 NKX2-4Q9H2Z4 354 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 DDX4Q9NQI0 724 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 PIH1D3Q9NQM4 214 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 DBNLQ9UJU6 430 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 DENND2AQ9ULE3 1009 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 HDAC5Q9UQL6 1122 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 FPGT-TNNI3KV9GXZ4 949 aa8.17□□□□□ -1.1
PTP4A1-202ENST00000470661 NPHP3-ACAD11A0A0J9YXS1 232 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 THBDP07204 575 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 PLS3P13797 630 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 L1CAMP32004 1257 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 ARL4AP40617 200 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 FKBP1BP68106 108 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 CAP1Q01518 475 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 PICALMQ13492 652 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 MVPQ14764 893 aaKnown RBP8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 SF1Q15637 639 aaKnown RBP8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 SLC4A8Q2Y0W8 1093 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 HHIPL2Q6UWX4 724 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 ADGRA1Q86SQ6 560 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 SPATA5Q8NB90 893 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 COPS5Q92905 334 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 SLC38A3Q99624 504 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 PTPN18Q99952 460 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 ZNF552Q9H707 407 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 RAI14Q9P0K7 980 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 MYH13Q9UKX3 1938 aa8.16□□□□□ -1.1
PTP4A1-202ENST00000470661 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 MYOCOSA0A1B0GUC4 107 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 DDTLA6NHG4 134 aaPredicted RBP8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 CCDC85CA6NKD9 419 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 NUDT19A8MXV4 375 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 CHGBP05060 677 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 SNRPB2P08579 225 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 PAMP19021 973 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 ECI1P42126 302 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 BTDP43251 543 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 RGS3P49796 1198 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 DYNLL1P63167 89 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 VGLL4Q14135 290 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 TTC39AQ5SRH9 613 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 MBLAC2Q68D91 279 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 AACSQ86V21 672 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 DZIP1Q86YF9 867 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 OPTNQ96CV9 577 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 EDC3Q96F86 508 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 ABHD8Q96I13 439 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 KRTAP4-12Q9BQ66 201 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 MCOLN1Q9GZU1 580 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 EPN3Q9H201 632 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 GOLGA2P5Q9HBQ8 144 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 TNFRSF12AQ9NP84 129 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 CYP26B1Q9NR63 512 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 ZBTB40Q9NUA8 1239 aa8.15□□□□□ -1.1
PTP4A1-202ENST00000470661 AK9Q5TCS8 1911 aa8.15□□□□□ -1.11
PTP4A1-202ENST00000470661 PAPPA2Q9BXP8 1791 aa8.15□□□□□ -1.11
PTP4A1-202ENST00000470661 WDHD1O75717 1129 aaPredicted RBP8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 GRIA2P42262 883 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 TM4SF4P48230 202 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 MMP14P50281 582 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 ERVFRD-1P60508 538 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 RRP1BQ14684 758 aaKnown RBP8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 PKN1Q16512 942 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 PRSS53Q2L4Q9 553 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 SHROOM1Q2M3G4 852 aaPredicted RBP8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 BICRALQ6AI39 1079 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
PTP4A1-202ENST00000470661 SH3RF3Q8TEJ3 882 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms