RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 HCFC2Q9Y5Z7 792 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 FAM186AA6NE01 2351 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 MYO10Q9HD67 2058 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 BRD1O95696 1058 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 CXCL14O95715 111 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 SP100P23497 879 aaPredicted RBP10.03□□□□□ -0.8
XRN1-208ENST00000470537 CA8P35219 290 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 LIFRP42702 1097 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
XRN1-208ENST00000470537 ELMSAN1Q6PJG2 1045 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 NIPA1Q7RTP0 329 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 OTOP3Q7RTS5 596 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 HEATR3Q7Z4Q2 680 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 ADSSL1Q8N142 457 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 TMEM105Q8N8V8 129 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 TRAPPC12Q8WVT3 735 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 ZBTB10Q96DT7 871 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 MAP7D2Q96T17 732 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 APOL5Q9BWW9 433 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 PLXNA4Q9HCM2 1894 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 CYP26B1Q9NR63 512 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 LIMD1Q9UGP4 676 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 DPP7Q9UHL4 492 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 SLC12A7Q9Y666 1083 aa10.03□□□□□ -0.8
XRN1-208ENST00000470537 FNDC1Q4ZHG4 1894 aaPredicted RBP10.02□□□□□ -0.8
XRN1-208ENST00000470537 IGKV6D-21A0A0A0MT36 114 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 C2orf71A6NGG8 1288 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 HIDE1A8MVS5 230 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 C2CD4DB7Z1M9 353 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 RBAK-RBAKDNI3L0D1 243 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 hCG_1984214I3L0E3 225 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 MEIS1O00470 390 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 MGEA5O60502 916 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 PDGFBP01127 241 aaPredicted RBP10.02□□□□□ -0.81
XRN1-208ENST00000470537 FGFR1P11362 822 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 SKIP12755 728 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 EIF4BP23588 611 aaKnown RBP10.02□□□□□ -0.81
XRN1-208ENST00000470537 POLGP54098 1239 aaPredicted RBP10.02□□□□□ -0.81
XRN1-208ENST00000470537 SH3BP2P78314 561 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 APOBRQ0VD83 1088 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 KIZQ2M2Z5 673 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 KIAA1841Q6NSI8 718 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 TRIM46Q7Z4K8 759 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 CABP7Q86V35 215 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 SRBD1Q8N5C6 995 aaKnown RBP10.02□□□□□ -0.81
XRN1-208ENST00000470537 ZNF713Q8N859 430 aaPredicted RBP10.02□□□□□ -0.81
XRN1-208ENST00000470537 FANCBQ8NB91 859 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 KCNG4Q8TDN1 519 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 FAM167AQ96KS9 214 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 CASD1Q96PB1 797 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 OSMRQ99650 979 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 POMKQ9H5K3 350 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 LY9Q9HBG7 655 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 AGO4Q9HCK5 861 aaKnown RBP10.02□□□□□ -0.81
XRN1-208ENST00000470537 TBC1D22BQ9NU19 505 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 PCDHGC3Q9UN70 934 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 IRAK3Q9Y616 596 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 KIAA1671Q9BY89 1806 aa10.02□□□□□ -0.81
XRN1-208ENST00000470537 LOXHD1Q8IVV2 1947 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 WDR87Q6ZQQ6 2873 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 A0A0U1RQF3 1178 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 PSAPP07602 524 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 AOC1P19801 751 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 RFX1P22670 979 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 NAPAP54920 295 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 AP3B2Q13367 1082 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 TDGQ13569 410 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 UBE2SQ16763 222 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 SWSAP1Q6NVH7 229 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 ZC3H14Q6PJT7 736 aaKnown RBP10.01□□□□□ -0.81
XRN1-208ENST00000470537 ABHD15Q6UXT9 468 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 FRMD5Q7Z6J6 570 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 FAM228AQ86W67 206 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 ECHDC2Q86YB7 292 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 SMAP1Q8IYB5 467 aaPredicted RBP10.01□□□□□ -0.81
XRN1-208ENST00000470537 FLCNQ8NFG4 579 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 BORCS6Q96GS4 357 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 RIC8AQ9NPQ8 531 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 NRBP2Q9NSY0 501 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 RBM28Q9NW13 759 aaKnown RBP10.01□□□□□ -0.81
XRN1-208ENST00000470537 IGSF9Q9P2J2 1179 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 FBXL21Q9UKT6 434 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 AKT3Q9Y243 479 aa10.01□□□□□ -0.81
XRN1-208ENST00000470537 MYO15AQ9UKN7 3530 aa10□□□□□ -0.81
XRN1-208ENST00000470537 FAM181BA6NEQ2 426 aa10□□□□□ -0.81
XRN1-208ENST00000470537 IPO5O00410 1097 aaKnown RBP10□□□□□ -0.81
XRN1-208ENST00000470537 PRC1O43663 620 aa10□□□□□ -0.81
XRN1-208ENST00000470537 CLASP2O75122 1294 aaKnown RBP10□□□□□ -0.81
XRN1-208ENST00000470537 GPR32O75388 356 aa10□□□□□ -0.81
XRN1-208ENST00000470537 LMNAP02545 664 aaKnown RBP10□□□□□ -0.81
XRN1-208ENST00000470537 ARP10275 920 aa10□□□□□ -0.81
XRN1-208ENST00000470537 ADCY7P51828 1080 aa10□□□□□ -0.81
XRN1-208ENST00000470537 NLRP11P59045 1033 aaKnown RBP10□□□□□ -0.81
XRN1-208ENST00000470537 DSC3Q14574 896 aa10□□□□□ -0.81
XRN1-208ENST00000470537 RARS2Q5T160 578 aaKnown RBP10□□□□□ -0.81
XRN1-208ENST00000470537 ZNF746Q6NUN9 644 aaPredicted RBP10□□□□□ -0.81
XRN1-208ENST00000470537 CYP26C1Q6V0L0 522 aa10□□□□□ -0.81
XRN1-208ENST00000470537 LRRC55Q6ZSA7 311 aa10□□□□□ -0.81
XRN1-208ENST00000470537 CCDC149Q6ZUS6 474 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms