RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 LRRIQ4A6NIV6 560 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 EIF3DO15371 548 aaKnown RBP eCLIP12.4□□□□□ -0.42
SREBF1-209ENST00000470247 GCNT3O95395 438 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 CCDC192P0DO97 292 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 SMTNP53814 917 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 PMS1P54277 932 aaKnown RBP12.4□□□□□ -0.42
SREBF1-209ENST00000470247 MRPS6P82932 125 aaKnown RBP12.4□□□□□ -0.42
SREBF1-209ENST00000470247 CDC42EP1Q00587 391 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 RBL2Q08999 1139 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 FAAP100Q0VG06 881 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 STX1AQ16623 288 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 KIZQ2M2Z5 673 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 TRIM60Q495X7 471 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 ZNF410Q86VK4 478 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 GAS2L3Q86XJ1 694 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 SLC17A8Q8NDX2 589 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 TMEM40Q8WWA1 233 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
SREBF1-209ENST00000470247 KCTD10Q9H3F6 313 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 FZD8Q9H461 694 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 KCNG1Q9UIX4 513 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
SREBF1-209ENST00000470247 TTLL13PA6NNM8 815 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 K7ENM7 598 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 TGFB1I1O43294 461 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 PQBP1O60828 265 aaKnown RBP12.39□□□□□ -0.43
SREBF1-209ENST00000470247 CSDE1O75534 798 aaKnown RBP12.39□□□□□ -0.43
SREBF1-209ENST00000470247 CKBP12277 381 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 CRYBB1P53674 252 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-209ENST00000470247 MBTD1Q05BQ5 628 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 ALCAMQ13740 583 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 TFDP1Q14186 410 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 GPNMBQ14956 572 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 AMHR2Q16671 573 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 ANO6Q4KMQ2 910 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
SREBF1-209ENST00000470247 ZNF618Q5T7W0 954 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 CENPPQ6IPU0 288 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 DEPTORQ8TB45 409 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 OSMRQ99650 979 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
SREBF1-209ENST00000470247 DNAJC25Q9H1X3 360 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 USP20Q9Y2K6 914 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 CDY2AQ9Y6F7 541 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 ZMYM2Q9UBW7 1377 aa12.39□□□□□ -0.43
SREBF1-209ENST00000470247 MROH7Q68CQ1 1323 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 K7ERI5 159 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 CAND2O75155 1236 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
SREBF1-209ENST00000470247 DARSP14868 501 aaKnown RBP12.38□□□□□ -0.43
SREBF1-209ENST00000470247 EIF4BP23588 611 aaKnown RBP12.38□□□□□ -0.43
SREBF1-209ENST00000470247 THPOP40225 353 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 EFNA5P52803 228 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 MBTPS1Q14703 1052 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 FAM187BQ17R55 369 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
SREBF1-209ENST00000470247 ZCWPW2Q504Y3 356 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-209ENST00000470247 SLC39A4Q6P5W5 647 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 SRGAP1Q7Z6B7 1085 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 MAP4K3Q8IVH8 894 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 NELFCDQ8IXH7 590 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 HVCN1Q96D96 273 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 DHTKD1Q96HY7 919 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-209ENST00000470247 C2orf40Q9H1Z8 148 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 TRPV2Q9Y5S1 764 aa12.38□□□□□ -0.43
SREBF1-209ENST00000470247 UBE4BO95155 1302 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 DCDC2CA8MYV0 355 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 TISP43B9A030 160 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 ANKRD63C9JTQ0 380 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 H0YCG3 227 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 PIGRP01833 764 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 CTSHP09668 335 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 SCP2P22307 547 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 FGFR4P22455 802 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 CCNE1P24864 410 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 ERCC5P28715 1186 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-209ENST00000470247 PHKA2P46019 1235 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 IQCB1Q15051 598 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 KLHL10Q6JEL2 608 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 TTI2Q6NXR4 508 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 CAGE1Q8TC20 777 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 NELFBQ8WX92 580 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 P2RX5Q93086 422 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 ACCSQ96QU6 501 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 DUSP9Q99956 384 aaKnown RBP12.37□□□□□ -0.43
SREBF1-209ENST00000470247 NOC4LQ9BVI4 516 aaKnown RBP12.37□□□□□ -0.43
SREBF1-209ENST00000470247 GCOM2Q9BZD3 368 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-209ENST00000470247 AGO3Q9H9G7 860 aaKnown RBP12.37□□□□□ -0.43
SREBF1-209ENST00000470247 NOD1Q9Y239 953 aa12.37□□□□□ -0.43
SREBF1-209ENST00000470247 GINS2Q9Y248 185 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms