RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 USP18Q9UMW8 372 aa10.07□□□□□ -0.8
SYNGAP1-205ENST00000470232 DCDC2BA2VCK2 349 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 ADH1AP07327 375 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 RBM25P49756 843 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 STARD6P59095 220 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 CSTF1Q05048 431 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 NOMO2Q5JPE7 1267 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 TMTC2Q8N394 836 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 PHKBQ93100 1093 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 SNX21Q969T3 373 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 FAM212AQ96EL1 285 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 FAM193BQ96PV7 902 aaPredicted RBP10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 OSBPL6Q9BZF3 934 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 PIDD1Q9HB75 910 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 MAN1C1Q9NR34 630 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 NRBP2Q9NSY0 501 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 ZSCAN32Q9NX65 697 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 ZFP37Q9Y6Q3 630 aaPredicted RBP10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 CACNA1IQ9P0X4 2223 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 CLUHO75153 1309 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 SPTBN2O15020 2390 aa10.06□□□□□ -0.8
SYNGAP1-205ENST00000470232 CHD6Q8TD26 2715 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 KANSL1LA0AUZ9 987 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 DDX39AO00148 427 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 MEIS1O00470 390 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 INPPL1O15357 1258 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 NCAM2O15394 837 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 CDC45O75419 566 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 DDAH1O94760 285 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 CNPP09543 421 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 LAMP2P13473 410 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 MCM4P33991 863 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 PHKA2P46019 1235 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 CLCN3P51790 818 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 PRKCQQ04759 706 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 DMWDQ09019 674 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 ITGB3BPQ13352 177 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 NIPA1Q7RTP0 329 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 CCDC60Q8IWA6 550 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 URGCPQ8TCY9 931 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 SMG7Q92540 1137 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 PGBD4Q96DM1 585 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 FAM167AQ96KS9 214 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 FAM126AQ9BYI3 521 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 GCOM2Q9BZD3 368 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 INO80BQ9C086 356 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 ADAMTS10Q9H324 1103 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 NRDE2Q9H7Z3 1164 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 TBC1D22BQ9NU19 505 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 SMG5Q9UPR3 1016 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 MAFBQ9Y5Q3 323 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-205ENST00000470232 ZBTB42B2RXF5 422 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 N4BP1O75113 896 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 GLUD1P00367 558 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 C1RP00736 705 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 URODP06132 367 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 PSAPP07602 524 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 CALM1P0DP23 149 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 CALM2P0DP24 149 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 CALM3P0DP25 149 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 RAB27AP51159 221 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 AK2P54819 239 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 NRLP54845 237 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 TWF2Q6IBS0 349 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 CASC1Q6TDU7 716 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 RSPO2Q6UXX9 243 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 NFXL1Q6ZNB6 911 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 TRMT1LQ7Z2T5 733 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 TMEM173Q86WV6 379 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 SMAP1Q8IYB5 467 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 MAML2Q8IZL2 1156 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 ZNF654Q8IZM8 581 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 NETO1Q8TDF5 533 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 KIF12Q96FN5 646 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 MYADMQ96S97 322 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 NELL2Q99435 816 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 TRAIPQ9BWF2 469 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 FOXQ1Q9C009 403 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 EPC1Q9H2F5 836 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 PLEKHA4Q9H4M7 779 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 TBC1D13Q9NVG8 400 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 MYH9P35579 1960 aaKnown RBP10.04□□□□□ -0.8
SYNGAP1-205ENST00000470232 C2orf16Q68DN1 1984 aa10.03□□□□□ -0.8
SYNGAP1-205ENST00000470232 POTEMA6NI47 508 aa10.03□□□□□ -0.8
SYNGAP1-205ENST00000470232 CCDC69A6NI79 296 aa10.03□□□□□ -0.8
SYNGAP1-205ENST00000470232 FAM170BA6NMN3 283 aa10.03□□□□□ -0.8
SYNGAP1-205ENST00000470232 ANHXE9PGG2 379 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms