RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DHX33Q9H6R0 707 aaKnown RBP19.57■□□□□ 0.72
COL7A1-208ENST00000470076 IFT122Q9HBG6 1241 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 FAM105AQ9NUU6 356 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 ZNF318Q5VUA4 2279 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 GAS2O43903 313 aaKnown RBP19.56■□□□□ 0.72
COL7A1-208ENST00000470076 BAG4O95429 457 aaKnown RBP19.56■□□□□ 0.72
COL7A1-208ENST00000470076 AK2P54819 239 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 OTUD6AQ7L8S5 288 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 PSPC1Q8WXF1 523 aaKnown RBP19.56■□□□□ 0.72
COL7A1-208ENST00000470076 LXNQ9BS40 222 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 S1PR5Q9H228 398 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 KCNH6Q9H252 994 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 BRMS1Q9HCU9 246 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 AGPAT5Q9NUQ2 364 aa19.56■□□□□ 0.72
COL7A1-208ENST00000470076 WRAP73Q9P2S5 460 aaPredicted RBP19.56■□□□□ 0.72
COL7A1-208ENST00000470076 C2orf71A6NGG8 1288 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 ZC3H11AO75152 810 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL7A1-208ENST00000470076 YWHABP31946 246 aaKnown RBP19.55■□□□□ 0.72
COL7A1-208ENST00000470076 KRT2P35908 639 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 NOMO2Q5JPE7 1267 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 LLGL2Q6P1M3 1020 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 SYCE2Q6PIF2 218 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 HFE2Q6ZVN8 426 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 SRGAP1Q7Z6B7 1085 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 ZNF579Q8NAF0 562 aaKnown RBP19.55■□□□□ 0.72
COL7A1-208ENST00000470076 PRPF31Q8WWY3 499 aaKnown RBP19.55■□□□□ 0.72
COL7A1-208ENST00000470076 CASP10Q92851 521 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 LPPQ93052 612 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 PGBD4Q96DM1 585 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 RPGRIP1Q96KN7 1286 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 MFSD14AQ96MC6 490 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 ZSWIM4Q9H7M6 989 aa19.55■□□□□ 0.72
COL7A1-208ENST00000470076 NT5C1B-RDH14C9J2C7 533 aa19.54■□□□□ 0.72
COL7A1-208ENST00000470076 SPIRE1Q08AE8 756 aa19.54■□□□□ 0.72
COL7A1-208ENST00000470076 EARS2Q5JPH6 523 aaKnown RBP19.54■□□□□ 0.72
COL7A1-208ENST00000470076 NCAPH2Q6IBW4 605 aa19.54■□□□□ 0.72
COL7A1-208ENST00000470076 TCP11Q8WWU5 503 aa19.54■□□□□ 0.72
COL7A1-208ENST00000470076 TBC1D13Q9NVG8 400 aa19.54■□□□□ 0.72
COL7A1-208ENST00000470076 RGL1Q9NZL6 768 aa19.54■□□□□ 0.72
COL7A1-208ENST00000470076 ARID2Q68CP9 1835 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 WDFY4Q6ZS81 3184 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 ASAP2O43150 1006 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 DTNBO60941 627 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 OFD1O75665 1012 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 SRGAP2CP0DJJ0 459 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 FDPSP14324 419 aaKnown RBP19.53■□□□□ 0.72
COL7A1-208ENST00000470076 RNASELQ05823 741 aaKnown RBP19.53■□□□□ 0.72
COL7A1-208ENST00000470076 LAMTOR4Q0VGL1 99 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 NR5A1Q13285 461 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 LONRF3Q496Y0 759 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 TPRNQ4KMQ1 711 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 XKR9Q5GH70 373 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 TRIM67Q6ZTA4 783 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 BMP8AQ7Z5Y6 402 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 VPS52Q8N1B4 723 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 GTF3C6Q969F1 213 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 TMEM143Q96AN5 459 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 DYDC2Q96IM9 177 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 NRDE2Q9H7Z3 1164 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 INPP5FQ9Y2H2 1132 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 HCFC2Q9Y5Z7 792 aa19.53■□□□□ 0.72
COL7A1-208ENST00000470076 FAM205CA6NFA0 338 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 MEIS3P2A8K0S8 358 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 CXCL14O95715 111 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 ZXDAP98168 799 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 GIT2Q14161 759 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 EMC2Q15006 297 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 ME3Q16798 604 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 MRPL10Q7Z7H8 261 aaKnown RBP19.52■□□□□ 0.72
COL7A1-208ENST00000470076 DDX53Q86TM3 631 aaKnown RBP19.52■□□□□ 0.72
COL7A1-208ENST00000470076 NECAB1Q8N987 351 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 URGCPQ8TCY9 931 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 TNFRSF25Q93038 417 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 IGSF21Q96ID5 467 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 ZBP1Q9H171 429 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 PPP4R2Q9NY27 417 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 IRAK3Q9Y616 596 aa19.52■□□□□ 0.72
COL7A1-208ENST00000470076 CNTNAP2Q9UHC6 1331 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 EIF5BO60841 1220 aaKnown RBP19.51■□□□□ 0.71
COL7A1-208ENST00000470076 CLASP2O75122 1294 aaKnown RBP19.51■□□□□ 0.71
COL7A1-208ENST00000470076 GALTP07902 379 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 CA8P35219 290 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 CYP4A11Q02928 519 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 ITIH3Q06033 890 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 CTTNQ14247 550 aaKnown RBP19.51■□□□□ 0.71
COL7A1-208ENST00000470076 PCBP1Q15365 356 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL7A1-208ENST00000470076 CES5AQ6NT32 575 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 FERMT3Q86UX7 667 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 TMEM173Q86WV6 379 aaPredicted RBP19.51■□□□□ 0.71
COL7A1-208ENST00000470076 TPH2Q8IWU9 490 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 TMEM87AQ8NBN3 555 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 RNF149Q8NC42 400 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 MTRQ99707 1265 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 APOL5Q9BWW9 433 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 MINDY3Q9H8M7 445 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 BMP2KQ9NSY1 1161 aaPredicted RBP19.51■□□□□ 0.71
COL7A1-208ENST00000470076 STK39Q9UEW8 545 aa19.51■□□□□ 0.71
COL7A1-208ENST00000470076 PCDHA12Q9UN75 941 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms