RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 PPP1R13BQ96KQ4 1090 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MAGEB10Q96LZ2 347 aaPredicted RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 BRD8Q9H0E9 1235 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 GDPD2Q9HCC8 539 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CPSF3Q9UKF6 684 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MYO9BQ13459 2157 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 SPHKAPQ2M3C7 1700 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 SLCO1B7G3V0H7 640 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 RFC5P40937 340 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 POLGP54098 1239 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 RESTQ13127 1097 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ITGA9Q13797 1035 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 Q3C1V9 767 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 AASDHQ4L235 1098 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 MAGOHBQ96A72 148 aaKnown RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 CCDC126Q96EE4 140 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 FMO2Q99518 471 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ATP6V0A4Q9HBG4 840 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 NRBP1Q9UHY1 535 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 MFAP3LO75121 409 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 NDUFA10O95299 355 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 A1BGP04217 495 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PHKA2P46019 1235 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 RECQLP46063 649 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 MXI1P50539 228 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 GPC5P78333 572 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 IFRD2Q12894 506 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 MKRN4PQ13434 485 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 GRAPQ13588 217 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 THOC5Q13769 683 aaKnown RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 NECTIN1Q15223 517 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ZNF827Q17R98 1081 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 LRCH2Q5VUJ6 765 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 RNF207Q6ZRF8 634 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 DAGLBQ8NCG7 672 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 GRAPLQ8TC17 118 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PDLIM2Q96JY6 352 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 FOPNLQ96NB1 174 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 TRIM4Q9C037 500 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 MTMR12Q9C0I1 747 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 SERPINB13Q9UIV8 391 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 RIPOR2Q9Y4F9 1068 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 TMEM110-MUSTN1A8MSY1 372 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 IL18RAPO95256 599 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 HK2P52789 917 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 XKR9Q5GH70 373 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 SYDE2Q5VT97 1194 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 KIAA1841Q6NSI8 718 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 SLF1Q9BQI6 1058 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 TRIM54Q9BYV2 358 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ZBTB12Q9Y330 459 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 AFG3L2Q9Y4W6 797 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 CLTCL1P53675 1640 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ASB14A6NK59 587 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 MAGEB2O15479 319 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PQBP1O60828 265 aaKnown RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ERBB2P04626 1255 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 KRT4P19013 534 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PIK3CAP42336 1068 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 GRM4Q14833 912 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PTPROQ16827 1216 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PFKFB3Q16875 520 aaPredicted RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 P3H1Q32P28 736 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 SGO2Q562F6 1265 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 BTNL9Q6UXG8 535 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 MIGA1Q8NAN2 632 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ATP11CQ8NB49 1132 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 RDH13Q8NBN7 331 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 CCDC127Q96BQ5 260 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PANK2Q9BZ23 570 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ASPSCR1Q9BZE9 553 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ZMYND12Q9H0C1 365 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 WWP1Q9H0M0 922 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 BCL2L12Q9HB09 334 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 C8orf4Q9NR00 106 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 LIMA1Q9UHB6 759 aaKnown RBP6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 ZNF148Q9UQR1 794 aa6.54□□□□□ -1.36
CCDC144A-212ENST00000470068 PRPSAP2O60256 369 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 KLHL2O95198 593 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 RPS12P25398 132 aaKnown RBP6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 ZAP70P43403 619 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 INPP1P49441 399 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 STX17P56962 302 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 ELF2Q15723 593 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 ISM2Q6H9L7 571 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 C1orf228Q6PIY5 440 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 PIGBQ92521 554 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 PHACTR3Q96KR7 559 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 USP28Q96RU2 1077 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 NDST4Q9H3R1 872 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 RRN3Q9NYV6 651 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 ITIH2P19823 946 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 RAD51Q06609 339 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 SNX17Q15036 470 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 EPHA7Q15375 998 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 ANO4Q32M45 955 aa6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 RSBN1LQ6PCB5 846 aaPredicted RBP6.53□□□□□ -1.36
CCDC144A-212ENST00000470068 CEP68Q76N32 757 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms