RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ERAP1Q9NZ08 941 aa19.82■□□□□ 0.76
SMC4-211ENST00000469858 HNRNPDLO14979 420 aaKnown RBP19.81■□□□□ 0.76
SMC4-211ENST00000469858 TRIM49P0CI25 452 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 TRIM49CP0CI26 452 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 APBA1Q02410 837 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 BFSP1Q12934 665 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 NYAP1Q6ZVC0 841 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 MSL3Q8N5Y2 521 aaKnown RBP19.81■□□□□ 0.76
SMC4-211ENST00000469858 ZSWIM2Q8NEG5 633 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 TRAPPC12Q8WVT3 735 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 EMID1Q96A84 441 aaPredicted RBP19.81■□□□□ 0.76
SMC4-211ENST00000469858 BICD1Q96G01 975 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 SUGCTQ9HAC7 445 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 HBP1O60381 514 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 NOL4O94818 638 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 KRT13P13646 458 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 ADSSP30520 456 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 ABCD1P33897 745 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 MEA1Q16626 185 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 EXOC3L4Q17RC7 722 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 DUSP28Q4G0W2 176 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 SLC39A4Q6P5W5 647 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 RRAGAQ7L523 313 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 NLRC4Q9NPP4 1024 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 CEP72Q9P209 647 aa19.81■□□□□ 0.76
SMC4-211ENST00000469858 EVPLQ92817 2033 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 MGAMO43451 1857 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 GOLGA8IPA6NC78 632 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 GOLGA8JA6NMD2 632 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 CCDC175P0C221 793 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 ZNF286BP0CG31 522 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 REXO1L1PQ8IX06 675 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 LRRC71Q8N4P6 559 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 BAP1Q92560 729 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 RNPEPQ9H4A4 650 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 FLRT1Q9NZU1 646 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 GCNT4Q9P109 453 aa19.8■□□□□ 0.76
SMC4-211ENST00000469858 LRRC53A6NM62 1247 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 SLC9A1P19634 815 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 CYP2B6P20813 491 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 POLR2FP61218 127 aaKnown RBP19.79■□□□□ 0.76
SMC4-211ENST00000469858 STRN3Q13033 797 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 CAPSQ13938 189 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 BRDTQ58F21 947 aaPredicted RBP19.79■□□□□ 0.76
SMC4-211ENST00000469858 PRAMEF19Q5SWL8 479 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 IQSEC1Q6DN90 963 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 CYP4F22Q6NT55 531 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 GBP6Q6ZN66 633 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 INTS8Q75QN2 995 aaKnown RBP19.79■□□□□ 0.76
SMC4-211ENST00000469858 OR6J1Q8NGC5 347 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 POMGNT1Q8WZA1 660 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 SAAL1Q96ER3 474 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 EDEM3Q9BZQ6 932 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 ADGRG1Q9Y653 693 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 TNPO2O14787 897 aaKnown RBP19.79■□□□□ 0.76
SMC4-211ENST00000469858 ADCY6O43306 1168 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 GAS2O43903 313 aaKnown RBP19.79■□□□□ 0.76
SMC4-211ENST00000469858 HOXC6P09630 235 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 ACTN1P12814 892 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 TM4SF4P48230 202 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 FMO5P49326 533 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 CCL14Q16627 93 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 IER5Q5VY09 327 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 EXOC8Q8IYI6 725 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 TCP11Q8WWU5 503 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 PRPF31Q8WWY3 499 aaKnown RBP19.79■□□□□ 0.76
SMC4-211ENST00000469858 HHIPL1Q96JK4 782 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 PLAGL2Q9UPG8 496 aa19.79■□□□□ 0.76
SMC4-211ENST00000469858 R3HCC1Q9Y3T6 440 aaKnown RBP19.79■□□□□ 0.76
SMC4-211ENST00000469858 K7ERI5 159 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 PON1P27169 355 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 LIG4P49917 911 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 TNFAIP2Q03169 654 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 MKRN4PQ13434 485 aaPredicted RBP19.78■□□□□ 0.76
SMC4-211ENST00000469858 PDXDC1Q6P996 788 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 GPIHBP1Q8IV16 184 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 ACRBPQ8NEB7 543 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 PSPC1Q8WXF1 523 aaKnown RBP19.78■□□□□ 0.76
SMC4-211ENST00000469858 USP6NLQ92738 828 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 GANQ9H2C0 597 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 USP20Q9Y2K6 914 aa19.78■□□□□ 0.76
SMC4-211ENST00000469858 IGKV6-21A0A0C4DH24 114 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 GTPBP10A4D1E9 387 aaKnown RBP19.77■□□□□ 0.76
SMC4-211ENST00000469858 PPFIA4O75335 1185 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 ADRB2P07550 413 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 CYP2C19P33261 490 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 RGS2P41220 211 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 VAMP7P51809 220 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 IGBP1P78318 339 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 DLG4P78352 724 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 SNRNP35Q16560 246 aaKnown RBP19.77■□□□□ 0.76
SMC4-211ENST00000469858 CBWD6Q4V339 395 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 CBWD3Q5JTY5 395 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 CBWD5Q5RIA9 395 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 CBWD2Q8IUF1 395 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 ZNF592Q92610 1267 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 ZBTB10Q96DT7 871 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 JPH2Q9BR39 696 aaPredicted RBP19.77■□□□□ 0.76
SMC4-211ENST00000469858 PLCB1Q9NQ66 1216 aa19.77■□□□□ 0.76
SMC4-211ENST00000469858 ZSWIM8A7E2V4 1837 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms