RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 A0A0U1RQF3 1178 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 DENND3A2RUS2 1198 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 LCHNA4D1U4 455 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 LINC01553A4QN01 128 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 INPPL1O15357 1258 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 TLL1O43897 1013 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 HIP1RO75146 1068 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 ARHGEF15O94989 841 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 SCP2P22307 547 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 AXLP30530 894 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 HOXA11P31270 313 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 RAB27AP51159 221 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 KRT85P78386 507 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 NUCB2P80303 420 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 TAP1Q03518 808 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 CEBPZQ03701 1054 aaKnown RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 NFX1Q12986 1120 aaKnown RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 ARSHQ5FYA8 562 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 FOXD4L5Q5VV16 416 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 PPP2R2DQ66LE6 453 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 SHC4Q6S5L8 630 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 TMCO2Q7Z6W1 182 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 CMTR2Q8IYT2 770 aaKnown RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 LEO1Q8WVC0 666 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 SPIRE2Q8WWL2 714 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 FOXD4L4Q8WXT5 416 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 CLP1Q92989 425 aaKnown RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 ZNF668Q96K58 619 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 GUCD1Q96NT3 240 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 NKX2-4Q9H2Z4 354 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 FZD8Q9H461 694 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 RNF19AQ9NV58 838 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 MTMR10Q9NXD2 777 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 RCOR1Q9UKL0 485 aa9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 PIN4Q9Y237 131 aaKnown RBP9.18□□□□□ -0.94
TRAPPC3-206ENST00000469757 FAM237AA0A1B0GTK4 181 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 LRRIQ4A6NIV6 560 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 HOXA2O43364 376 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 ZNF623O75123 536 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 ERLIN2O94905 339 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 STAG3L1P0CL83 205 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 SRGAP2CP0DJJ0 459 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 PLS3P13797 630 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 MYOGP15173 224 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 FGFR4P22455 802 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 NPTX2P47972 431 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 EFNA5P52803 228 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 ERVK-21P61565 698 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 DMP1Q13316 513 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 UBXN11Q5T124 520 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 FAM102BQ5T8I3 360 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 CNNM4Q6P4Q7 775 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 NOTUMQ6P988 496 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 CCDC73Q6ZRK6 1079 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 CATSPER4Q7RTX7 472 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 GPBP1Q86WP2 473 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 ECHDC2Q86YB7 292 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 DEFB123Q8N688 67 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 SAMD11Q96NU1 681 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 YME1L1Q96TA2 773 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 REEP2Q9BRK0 252 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 NTPCRQ9BSD7 190 aaKnown RBP9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 TNMDQ9H2S6 317 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 CUEDC2Q9H467 287 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 ZNF576Q9H609 170 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 SLC28A3Q9HAS3 691 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 MAGEF1Q9HAY2 307 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 PRMT7Q9NVM4 692 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 TFIP11Q9UBB9 837 aaKnown RBP9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 CCDC39Q9UFE4 941 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 MYH11P35749 1972 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 ATG2AQ2TAZ0 1938 aa9.17□□□□□ -0.94
TRAPPC3-206ENST00000469757 A0A1B0GUA9 196 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 FRMD3A2A2Y4 597 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 C5orf67F2Z3F1 127 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 INO80B-WBP1J3KQ70 363 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 B4GALT5O43286 388 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 CSDE1O75534 798 aaKnown RBP9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 SLC34A2O95436 690 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 EOMESO95936 686 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 SKIP12755 728 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 ZSCAN20P17040 1043 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 ANP32AP39687 249 aaKnown RBP9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 STAT6P42226 847 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 NCKAP1LP55160 1127 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 ZRSR1Q15695 479 aaKnown RBP9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 CLLU1OSQ5K130 101 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 SPECC1Q5M775 1068 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 Q7L0L9 218 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 TAS1R3Q7RTX0 852 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 MRPL10Q7Z7H8 261 aaKnown RBP9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 ZBTB8OSQ8IWT0 167 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 TMEM161BQ8NDZ6 487 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 RASSF8Q8NHQ8 419 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 DEPTORQ8TB45 409 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 IFT74Q96LB3 600 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 FIZ1Q96SL8 496 aa9.16□□□□□ -0.94
TRAPPC3-206ENST00000469757 PLIN2Q99541 437 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms