RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 ATG4CQ96DT6 458 aa19.34■□□□□ 0.69
MCF2L-221ENST00000469415 PI4K2AQ9BTU6 479 aa19.34■□□□□ 0.69
MCF2L-221ENST00000469415 STK33Q9BYT3 514 aa19.34■□□□□ 0.69
MCF2L-221ENST00000469415 AMFRQ9UKV5 643 aa19.34■□□□□ 0.69
MCF2L-221ENST00000469415 GUCY1A3Q02108 690 aa19.33■□□□□ 0.69
MCF2L-221ENST00000469415 EMBQ6PCB8 327 aa19.33■□□□□ 0.69
MCF2L-221ENST00000469415 FOXR2Q6PJQ5 311 aa19.33■□□□□ 0.69
MCF2L-221ENST00000469415 DLK2Q6UY11 383 aa19.33■□□□□ 0.69
MCF2L-221ENST00000469415 MYOZ2Q9NPC6 264 aa19.33■□□□□ 0.69
MCF2L-221ENST00000469415 CWC15Q9P013 229 aaKnown RBP19.33■□□□□ 0.69
MCF2L-221ENST00000469415 ZNRF3Q9ULT6 936 aa19.33■□□□□ 0.69
MCF2L-221ENST00000469415 ZNF233A6NK53 670 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 FTLP02792 175 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 ICAM1P05362 532 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 P4HBP07237 508 aaKnown RBP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 VAMP7P51809 220 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 ARHGEF16Q5VV41 709 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 FAM160B2Q86V87 743 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 CLEC4DQ8WXI8 215 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 DHX38Q92620 1227 aaKnown RBP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 HSPBP1Q9NZL4 362 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 COG5Q9UP83 839 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 PLAAQ9Y263 795 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 EIF3DO15371 548 aaKnown RBP eCLIP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 CYP26A1O43174 497 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 QARSP47897 775 aaKnown RBP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 BAATQ14032 418 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 NBPF12Q5TAG4 269 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 SLC30A5Q8TAD4 765 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 BCAS4Q8TDM0 211 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 CAPS2Q9BXY5 557 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 PSD3Q9NYI0 1048 aa19.33■□□□□ 0.68
MCF2L-221ENST00000469415 RRP15Q9Y3B9 282 aaKnown RBP19.33■□□□□ 0.68
MCF2L-221ENST00000469415 ANKRD63C9JTQ0 380 aa19.32■□□□□ 0.68
MCF2L-221ENST00000469415 SGPL1O95470 568 aa19.32■□□□□ 0.68
MCF2L-221ENST00000469415 IFI16Q16666 785 aaKnown RBP19.32■□□□□ 0.68
MCF2L-221ENST00000469415 NT5DC3Q86UY8 548 aa19.32■□□□□ 0.68
MCF2L-221ENST00000469415 RPUSD2Q8IZ73 545 aaKnown RBP19.32■□□□□ 0.68
MCF2L-221ENST00000469415 GPR88Q9GZN0 384 aa19.32■□□□□ 0.68
MCF2L-221ENST00000469415 RPAP3Q9H6T3 665 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-221ENST00000469415 DHX15O43143 795 aaKnown RBP19.32■□□□□ 0.68
MCF2L-221ENST00000469415 JDP2Q8WYK2 163 aa19.32■□□□□ 0.68
MCF2L-221ENST00000469415 MYO1CO00159 1063 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 CCNE2O96020 404 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 PRKCIP41743 596 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 IRAK1P51617 712 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 CYFIP1Q7L576 1253 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 RTKN2Q8IZC4 609 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 AGO4Q9HCK5 861 aaKnown RBP19.31■□□□□ 0.68
MCF2L-221ENST00000469415 GDF3Q9NR23 364 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 OPA1O60313 960 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 ADRB2P07550 413 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 KRT35Q92764 455 aa19.31■□□□□ 0.68
MCF2L-221ENST00000469415 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.31■□□□□ 0.684e-7■□□□□ 9
MCF2L-221ENST00000469415 PTGER2P43116 358 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 SETQ01105 290 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ITIH3Q06033 890 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 TRAF1Q13077 416 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-221ENST00000469415 RNF207Q6ZRF8 634 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 VCAM1P19320 739 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ZNF572Q7Z3I7 529 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-221ENST00000469415 SLC47A2Q86VL8 602 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ALG3Q92685 438 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 LRRC4CQ9HCJ2 640 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ERVK-5Q9HDB9 667 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 HARSP12081 509 aaKnown RBP19.3■□□□□ 0.68
MCF2L-221ENST00000469415 MXI1P50539 228 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ZNF131P52739 623 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ODF2Q5BJF6 829 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 CIAPIN1Q6FI81 312 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 XXYLT1Q8NBI6 393 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 BICD1Q96G01 975 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 ODF2LQ9ULJ1 636 aa19.3■□□□□ 0.68
MCF2L-221ENST00000469415 KRT5P13647 590 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 LMNB1P20700 586 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 HMGCS2P54868 508 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 PPFIA1Q13136 1202 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 DAB2IPQ5VWQ8 1189 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 LLGL2Q6P1M3 1020 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 LMBR1Q8WVP7 490 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 CEP170P1Q96L14 293 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 RIT2Q99578 217 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 AGPAT1Q99943 283 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 GABBR1Q9UBS5 961 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 PTPN22Q9Y2R2 807 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 GREB1LQ9C091 1923 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-221ENST00000469415 COL4A5P29400 1685 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 DENND3A2RUS2 1198 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 CTNNA1P35221 906 aaKnown RBP19.29■□□□□ 0.68
MCF2L-221ENST00000469415 SEC24CP53992 1094 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 DCAF12L1Q5VU92 463 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 SEMA4DQ92854 862 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 RNPC3Q96LT9 517 aaKnown RBP19.29■□□□□ 0.68
MCF2L-221ENST00000469415 ACCSQ96QU6 501 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 TAF1DQ9H5J8 278 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-221ENST00000469415 DMAC2Q9NW81 257 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 RNF14Q9UBS8 474 aa19.29■□□□□ 0.68
MCF2L-221ENST00000469415 ATP8A1Q9Y2Q0 1164 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms