RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 EIF2AK1Q9BQI3 630 aaKnown RBP24.32■■□□□ 1.48
TTC28-204ENST00000468807 SPG21Q9NZD8 308 aa24.32■■□□□ 1.48
TTC28-204ENST00000468807 CLEC1BQ9P126 229 aa24.32■■□□□ 1.48
TTC28-204ENST00000468807 INPP5FQ9Y2H2 1132 aa24.32■■□□□ 1.48
TTC28-204ENST00000468807 PI4K2BG5E9Z4 385 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 WNT7AO00755 349 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 GLP2RO95838 553 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 CA8P35219 290 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 PLCB3Q01970 1234 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 LAMTOR4Q0VGL1 99 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 PDE12Q6L8Q7 609 aaKnown RBP24.31■■□□□ 1.48
TTC28-204ENST00000468807 TCP11Q8WWU5 503 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 IFT122Q9HBG6 1241 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 FAM105AQ9NUU6 356 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 LZTS1Q9Y250 596 aa24.31■■□□□ 1.48
TTC28-204ENST00000468807 SLITRK3O94933 977 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 RBM10P98175 930 aaKnown RBP24.3■■□□□ 1.48
TTC28-204ENST00000468807 DUSP6Q16828 381 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 TMC7Q7Z402 723 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 RNF149Q8NC42 400 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 C8orf76Q96K31 380 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 MSLNLQ96KJ4 702 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 POP1Q99575 1024 aaKnown RBP24.3■■□□□ 1.48
TTC28-204ENST00000468807 LRFN3Q9BTN0 628 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 AGPAT5Q9NUQ2 364 aa24.3■■□□□ 1.48
TTC28-204ENST00000468807 NT5C1B-RDH14C9J2C7 533 aa24.29■■□□□ 1.48
TTC28-204ENST00000468807 FSCN2O14926 492 aa24.29■■□□□ 1.48
TTC28-204ENST00000468807 GAS2O43903 313 aaKnown RBP24.29■■□□□ 1.48
TTC28-204ENST00000468807 ZC3H11AO75152 810 aaKnown RBP eCLIP24.29■■□□□ 1.48
TTC28-204ENST00000468807 ALDH7A1P49419 539 aaKnown RBP24.29■■□□□ 1.48
TTC28-204ENST00000468807 BCAR1P56945 870 aa24.29■■□□□ 1.48
TTC28-204ENST00000468807 GLB1LQ6UWU2 654 aa24.29■■□□□ 1.48
TTC28-204ENST00000468807 SRGAP1Q7Z6B7 1085 aa24.29■■□□□ 1.48
TTC28-204ENST00000468807 CDCA3Q99618 268 aaPredicted RBP24.29■■□□□ 1.48
TTC28-204ENST00000468807 ALADP13716 330 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 MCM7P33993 719 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 RAB27AP51159 221 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 RNASELQ05823 741 aaKnown RBP24.28■■□□□ 1.48
TTC28-204ENST00000468807 LLGL2Q6P1M3 1020 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 FERMT3Q86UX7 667 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 SLC39A11Q8N1S5 342 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 PGBD4Q96DM1 585 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 TRAIPQ9BWF2 469 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 MINDY3Q9H8M7 445 aa24.28■■□□□ 1.48
TTC28-204ENST00000468807 NGRNQ9NPE2 291 aaKnown RBP24.28■■□□□ 1.48
TTC28-204ENST00000468807 FSD2A1L4K1 749 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 POTEMA6NI47 508 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 MEIS3P2A8K0S8 358 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 HIDE1A8MVS5 230 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 ASAP2O43150 1006 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 ERLIN2O94905 339 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 SRGAP2BP0DMP2 458 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 COASYQ13057 564 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 NOMO2Q5JPE7 1267 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 SMRP1Q8NCR6 262 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 TMEM169Q96HH4 297 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 HSD17B14Q9BPX1 270 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 GBP3Q9H0R5 595 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 PCDHB2Q9Y5E7 798 aa24.27■■□□□ 1.48
TTC28-204ENST00000468807 C19orf67A6NJJ6 358 aa24.26■■□□□ 1.47
TTC28-204ENST00000468807 EYA4O95677 639 aa24.26■■□□□ 1.47
TTC28-204ENST00000468807 GNL2Q13823 731 aaKnown RBP24.26■■□□□ 1.47
TTC28-204ENST00000468807 FAM184AQ8NB25 1140 aa24.26■■□□□ 1.47
TTC28-204ENST00000468807 VN1R2Q8NFZ6 395 aa24.26■■□□□ 1.47
TTC28-204ENST00000468807 MTMR9Q96QG7 549 aa24.26■■□□□ 1.47
TTC28-204ENST00000468807 TMEM60Q9H2L4 133 aa24.26■■□□□ 1.47
TTC28-204ENST00000468807 C11orf16Q9NQ32 467 aa24.26■■□□□ 1.47
TTC28-204ENST00000468807 A0A087WWV3 80 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 DCXO43602 365 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 GPR37L1O60883 481 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 TECP42680 631 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 TFDP1Q14186 410 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 MXD4Q14582 209 aaPredicted RBP24.25■■□□□ 1.47
TTC28-204ENST00000468807 SMC1AQ14683 1233 aaKnown RBP24.25■■□□□ 1.47
TTC28-204ENST00000468807 URGCPQ8TCY9 931 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 PIGOQ8TEQ8 1089 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 RSPH1Q8WYR4 309 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 LLPHQ9BRT6 129 aaKnown RBP24.25■■□□□ 1.47
TTC28-204ENST00000468807 XPNPEP1Q9NQW7 623 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 ANKEF1Q9NU02 776 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 TBC1D13Q9NVG8 400 aa24.25■■□□□ 1.47
TTC28-204ENST00000468807 USP15Q9Y4E8 981 aaPredicted RBP24.25■■□□□ 1.47
TTC28-204ENST00000468807 TRIOO75962 3097 aa24.24■■□□□ 1.47
TTC28-204ENST00000468807 INO80B-WBP1J3KQ70 363 aa24.24■■□□□ 1.47
TTC28-204ENST00000468807 ZNF623O75123 536 aa24.24■■□□□ 1.47
TTC28-204ENST00000468807 OFD1O75665 1012 aa24.24■■□□□ 1.47
TTC28-204ENST00000468807 DGAT1O75907 488 aa24.24■■□□□ 1.47
TTC28-204ENST00000468807 LYPLA2O95372 231 aa24.24■■□□□ 1.47
TTC28-204ENST00000468807 ZSCAN31Q96LW9 406 aaPredicted RBP24.24■■□□□ 1.47
TTC28-204ENST00000468807 APOL5Q9BWW9 433 aa24.24■■□□□ 1.47
TTC28-204ENST00000468807 RARRES1P49788 294 aa24.23■■□□□ 1.47
TTC28-204ENST00000468807 NCBP1Q09161 790 aaKnown RBP24.23■■□□□ 1.47
TTC28-204ENST00000468807 BMS1Q14692 1282 aaKnown RBP24.23■■□□□ 1.47
TTC28-204ENST00000468807 ZNF174Q15697 407 aa24.23■■□□□ 1.47
TTC28-204ENST00000468807 TMEM87AQ8NBN3 555 aa24.23■■□□□ 1.47
TTC28-204ENST00000468807 ASAP3Q8TDY4 903 aa24.23■■□□□ 1.47
TTC28-204ENST00000468807 NRDE2Q9H7Z3 1164 aa24.23■■□□□ 1.47
TTC28-204ENST00000468807 RSAD1Q9HA92 442 aa24.23■■□□□ 1.47
TTC28-204ENST00000468807 HCN4Q9Y3Q4 1203 aa24.23■■□□□ 1.47
TTC28-204ENST00000468807 USO1O60763 962 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms