RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 GTF2A1LQ9UNN4 478 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 STXBP5LQ9Y2K9 1186 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 NR2E3Q9Y5X4 410 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 RSF1Q96T23 1441 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ZC3H12DA2A288 527 aaKnown RBP4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 LRRC10BA6NIK2 292 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 RASA4BC9J798 803 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 F8W031 263 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 SGSM2O43147 1006 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 RASA4O43374 803 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 ZGLP1P0C6A0 271 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 FAHP16930 419 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 CHKAP35790 457 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 CD96P40200 585 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 PIK3CBP42338 1070 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 ECE1P42892 770 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 PRIM2P49643 509 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 BNIP3Q12983 259 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 MYBPC3Q14896 1274 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 NOMO1Q15155 1222 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 ELF2Q15723 593 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 CPSF6Q16630 551 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC4A8Q2Y0W8 1093 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 THEMIS2Q5TEJ8 643 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 PPP4R3AQ6IN85 833 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 FAM180AQ6UWF9 173 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 DPP9Q86TI2 863 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 RTN4RL1Q86UN2 441 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 TP53INP2Q8IXH6 220 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 DRC7Q8IY82 874 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 DEPTORQ8TB45 409 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 FOXRED1Q96CU9 486 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 DDX11Q96FC9 970 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 PEX11GQ96HA9 241 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 CDK5RAP3Q96JB5 506 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 C7orf25Q9BPX7 421 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 PLCD4Q9BRC7 762 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 NOL10Q9BSC4 688 aaKnown RBP4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 LRFN3Q9BTN0 628 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 MTG2Q9H4K7 406 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 RSAD1Q9HA92 442 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 DMRT3Q9NQL9 472 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 CDC23Q9UJX2 597 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 TMEM59LQ9UK28 342 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 ACSL6Q9UKU0 697 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 VAV3Q9UKW4 847 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 LZTS1Q9Y250 596 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 IPPQ9Y573 584 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 PCDHA13Q9Y5I0 950 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 CDY2AQ9Y6F7 541 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 SMARCA4P51532 1647 aa4.52□□□□□ -1.69
HMGB1P25-201ENST00000468402 H3BUI4 141 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 NFIBO00712 420 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC26A4O43511 780 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 PRLP01236 227 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 PFKMP08237 780 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 GLI4P10075 376 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 FOSL1P15407 271 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 ABCB4P21439 1286 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 PTGS1P23219 599 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 TNFSF4P23510 183 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 AOAHP28039 575 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 MC4RP32245 332 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 RENBPP51606 427 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 MAPK10P53779 464 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 DBPQ10586 325 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 GRM1Q13255 1194 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 ADRM1Q16186 407 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 PKN1Q16512 942 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 GGT6Q6P531 493 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 MAEAQ7L5Y9 396 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 RHOT1Q8IXI2 618 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 SH2D3CQ8N5H7 860 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 CCDC33Q8N5R6 958 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 SPATA5Q8NB90 893 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 NETO2Q8NC67 525 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 RGMAQ96B86 450 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 MTFMTQ96DP5 389 aaKnown RBP4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 FOXB1Q99853 325 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 LRRC27Q9C0I9 530 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 ZHX3Q9H4I2 956 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 KIAA1586Q9HCI6 787 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC39A2Q9NP94 309 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 NGRNQ9NPE2 291 aaKnown RBP4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 LMCD1Q9NZU5 365 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 STAP2Q9UGK3 403 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 GPR160Q9UJ42 338 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 TMPRSS11EQ9UL52 423 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 SYNPO2Q9UMS6 1093 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 MAGED2Q9UNF1 606 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 CEP83Q9Y592 693 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 PCDHB6Q9Y5E3 794 aa4.51□□□□□ -1.69
HMGB1P25-201ENST00000468402 KLRG2A4D1S0 409 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 FITM1A5D6W6 292 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 NRP2O60462 931 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 EDNRBP24530 442 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 IL12RB1P42701 662 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 TM4SF4P48230 202 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 CCT5P48643 541 aa4.5□□□□□ -1.69
HMGB1P25-201ENST00000468402 SARSP49591 514 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms