RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SLC4A5Q9BY07 1137 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 CERS4Q9HA82 394 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 XPNPEP1Q9NQW7 623 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
COL4A6-205ENST00000468338 C1orf112Q9NSG2 853 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 SUCLA2Q9P2R7 463 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-205ENST00000468338 SMC3Q9UQE7 1217 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 PCDHB6Q9Y5E3 794 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 TRANK1O15050 2925 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 MYO7AQ13402 2215 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 LAD1O00515 517 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 MUTP22033 750 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 RPA1P27694 616 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 TECP42680 631 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 RARRES1P49788 294 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 GRB10Q13322 594 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
COL4A6-205ENST00000468338 PDIA5Q14554 519 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 RILPL1Q5EBL4 403 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 XKR9Q5GH70 373 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 CATSPER3Q86XQ3 398 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 SAMD11Q96NU1 681 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 ADAM2Q99965 735 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 C17orf80Q9BSJ5 609 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 ELAC1Q9H777 363 aaKnown RBP12.44□□□□□ -0.42
COL4A6-205ENST00000468338 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 TUFT1Q9NNX1 390 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 LMCD1Q9NZU5 365 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 BRWD1Q9NSI6 2320 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 RALGAPA2Q2PPJ7 1873 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 FNDC1Q4ZHG4 1894 aaPredicted RBP12.44□□□□□ -0.42
COL4A6-205ENST00000468338 NLRC5Q86WI3 1866 aa12.44□□□□□ -0.42
COL4A6-205ENST00000468338 PRUNE2Q8WUY3 3088 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 EYSQ5T1H1 3165 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 ADGRA3Q8IWK6 1321 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 A0A087WZ62 844 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 C5orf67F2Z3F1 127 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 ARHGAP33O14559 1287 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 ASAP2O43150 1006 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 MED24O75448 989 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 DGAT1O75907 488 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 STAG3L1P0CL83 205 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 PRPHP41219 470 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 POLGP54098 1239 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-205ENST00000468338 EMC2Q15006 297 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 EPC2Q52LR7 807 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
COL4A6-205ENST00000468338 FERMT3Q86UX7 667 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 KSR1Q8IVT5 923 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 CMTR2Q8IYT2 770 aaKnown RBP12.43□□□□□ -0.42
COL4A6-205ENST00000468338 INTS4Q96HW7 963 aaKnown RBP12.43□□□□□ -0.42
COL4A6-205ENST00000468338 ZNF668Q96K58 619 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-205ENST00000468338 FDXACB1Q9BRP7 624 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-205ENST00000468338 GCOM2Q9BZD3 368 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-205ENST00000468338 COL4A3BPQ9Y5P4 624 aa12.43□□□□□ -0.42
COL4A6-205ENST00000468338 H3BQV1 296 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 IGFBP4P22692 258 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 ARL2P36404 184 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 POU5F1BQ06416 359 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 IL17AQ16552 155 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 RHPN2Q8IUC4 686 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 TMEM192Q8IY95 271 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 FIBCD1Q8N539 461 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 ERMNQ8TAM6 284 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
COL4A6-205ENST00000468338 PSPC1Q8WXF1 523 aaKnown RBP12.42□□□□□ -0.42
COL4A6-205ENST00000468338 HLA-CQ95604 372 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 SNX21Q969T3 373 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
COL4A6-205ENST00000468338 CHST12Q9NRB3 414 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 TMEM161AQ9NX61 479 aa12.42□□□□□ -0.42
COL4A6-205ENST00000468338 DBR1Q9UK59 544 aaKnown RBP12.42□□□□□ -0.42
COL4A6-205ENST00000468338 COL4A4P53420 1690 aaPredicted RBP12.42□□□□□ -0.42
COL4A6-205ENST00000468338 A0A0U1RQF3 1178 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 DENND3A2RUS2 1198 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 H3BNC9 293 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 CSDE1O75534 798 aaKnown RBP12.41□□□□□ -0.42
COL4A6-205ENST00000468338 RB1P06400 928 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 BMPR1AP36894 532 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 ATP2C1P98194 919 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-205ENST00000468338 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-205ENST00000468338 MCTP1Q6DN14 999 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 SRGAP1Q7Z6B7 1085 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 ZNF598Q86UK7 904 aaKnown RBP12.41□□□□□ -0.42
COL4A6-205ENST00000468338 SLC17A8Q8NDX2 589 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 PIGOQ8TEQ8 1089 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 NACC1Q96RE7 527 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 MTRQ99707 1265 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 PLVAPQ9BX97 442 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 RNF19AQ9NV58 838 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 PCDHB7Q9Y5E2 793 aa12.41□□□□□ -0.42
COL4A6-205ENST00000468338 A0A087WWV3 80 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms