RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PPM1EQ8WY54 764 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 RSPH1Q8WYR4 309 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
ATG4B-215ENST00000468018 POLR3FQ9H1D9 316 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-215ENST00000468018 GPRC5CQ9NQ84 441 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
ATG4B-215ENST00000468018 HCSTQ9UBK5 93 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 KIAA1024Q9UPX6 916 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 A0A0C4DFX4 3053 aa16.83■□□□□ 0.29
ATG4B-215ENST00000468018 GRM6O15303 877 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 TSPAN1O60635 241 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 BMP15O95972 392 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 SKIP12755 728 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 CDC25AP30304 524 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 RAB27AP51159 221 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 RESTQ13127 1097 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 COL19A1Q14993 1142 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 UBXN11Q5T124 520 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 KRT79Q5XKE5 535 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 TWF2Q6IBS0 349 aaKnown RBP16.83■□□□□ 0.28
ATG4B-215ENST00000468018 KCNK18Q7Z418 384 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 MICALL1Q8N3F8 863 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 BSNDQ8WZ55 320 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 PNMA5Q96PV4 448 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 BHMT2Q9H2M3 363 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 TYW1Q9NV66 732 aaKnown RBP16.83■□□□□ 0.28
ATG4B-215ENST00000468018 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 PLAGL2Q9UPG8 496 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 MTMR6Q9Y217 621 aa16.83■□□□□ 0.28
ATG4B-215ENST00000468018 TRIP11Q15643 1979 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 TCF20Q9UGU0 1960 aaKnown RBP16.82■□□□□ 0.28
ATG4B-215ENST00000468018 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-215ENST00000468018 ARHGEF35A5YM69 484 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 EYA4O95677 639 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 ITGB1P05556 798 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 AXLP30530 894 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 PTPAQ15257 358 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 PTPROQ16827 1216 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 TIGD5Q53EQ6 642 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 PPP4R3CPQ6ZMV5 832 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 MRPL10Q7Z7H8 261 aaKnown RBP16.82■□□□□ 0.28
ATG4B-215ENST00000468018 LRRC43Q8N309 656 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 KLHL23Q8NBE8 558 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 SPPL3Q8TCT6 385 aa16.82■□□□□ 0.28
ATG4B-215ENST00000468018 ATXN2LQ8WWM7 1075 aaKnown RBP16.82■□□□□ 0.28
ATG4B-215ENST00000468018 MORC2Q9Y6X9 1032 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-215ENST00000468018 VWA3AA6NCI4 1184 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 MEIS3P2A8K0S8 358 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 E9PMD0 336 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 SLC26A4O43511 780 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 SF3A1Q15459 793 aaKnown RBP16.81■□□□□ 0.28
ATG4B-215ENST00000468018 FAM187BQ17R55 369 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 AGMOQ6ZNB7 445 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 MAEAQ7L5Y9 396 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 CCDC51Q96ER9 411 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 AK8Q96MA6 479 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 FZD8Q9H461 694 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 PCDHB2Q9Y5E7 798 aa16.81■□□□□ 0.28
ATG4B-215ENST00000468018 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-215ENST00000468018 ERLIN2O94905 339 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 ARF4P18085 180 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-215ENST00000468018 LAG3P18627 525 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 IBSPP21815 317 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-215ENST00000468018 DNAJB1P25685 340 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 GRIN1Q05586 938 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 TMEM119Q4V9L6 283 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 C1orf186Q6ZWK4 172 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 COLGALT1Q8NBJ5 622 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 SMG8Q8ND04 991 aaKnown RBP16.8■□□□□ 0.28
ATG4B-215ENST00000468018 HELQQ8TDG4 1101 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 LPPQ93052 612 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 PRIMPOLQ96LW4 560 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 CCDC113Q9H0I3 377 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 NSUN3Q9H649 340 aaKnown RBP16.8■□□□□ 0.28
ATG4B-215ENST00000468018 ALG13Q9NP73 1137 aaKnown RBP16.8■□□□□ 0.28
ATG4B-215ENST00000468018 AAASQ9NRG9 546 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 COG5Q9UP83 839 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 NCOR1O75376 2440 aa16.8■□□□□ 0.28
ATG4B-215ENST00000468018 A0A1B0GUA9 196 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 INO80B-WBP1J3KQ70 363 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 INPPL1O15357 1258 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 STX6O43752 255 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 OFD1O75665 1012 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 NCLP19338 710 aaKnown RBP16.79■□□□□ 0.28
ATG4B-215ENST00000468018 NAMPTP43490 491 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 PLCB3Q01970 1234 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 UBE3AQ05086 875 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 MAPK7Q13164 816 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 CSPP1Q1MSJ5 1256 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 RINT1Q6NUQ1 792 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 NOTUMQ6P988 496 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 ABI1Q8IZP0 508 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 DAW1Q8N136 415 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 KIFAP3Q92845 792 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 MRPL9Q9BYD2 267 aaKnown RBP16.79■□□□□ 0.28
ATG4B-215ENST00000468018 NT5C3AQ9H0P0 336 aa16.79■□□□□ 0.28
ATG4B-215ENST00000468018 CSRNP2Q9H175 543 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms