RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 POU5F1BQ06416 359 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 KCNA1Q09470 495 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 SNX17Q15036 470 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 L1TD1Q5T7N2 865 aaKnown RBP13.04□□□□□ -0.32
RNF13-208ENST00000467996 SLC39A5Q6ZMH5 540 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 TAS1R3Q7RTX0 852 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 ZBTB8OSQ8IWT0 167 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 NELFBQ8WX92 580 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 NLRP7Q8WX94 980 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 KCNN1Q92952 543 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 SCLT1Q96NL6 688 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 FDXACB1Q9BRP7 624 aaPredicted RBP13.04□□□□□ -0.32
RNF13-208ENST00000467996 NFKBIZQ9BYH8 718 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 CCDC113Q9H0I3 377 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 TRPV6Q9H1D0 765 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 C2orf40Q9H1Z8 148 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 C11orf49Q9H6J7 331 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 MROH7Q68CQ1 1323 aa13.04□□□□□ -0.32
RNF13-208ENST00000467996 CD4P01730 458 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 RPLP2P05387 115 aaKnown RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 SCP2P22307 547 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 ABCD1P33897 745 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 HOXD13P35453 343 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 PHKA2P46019 1235 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 ATN1P54259 1190 aaPredicted RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 PTENP60484 403 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 PAK1Q13153 545 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 KIZQ2M2Z5 673 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 RPAINQ86UA6 219 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 RSPH3Q86UC2 560 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 NME8Q8N427 588 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 P2RX5Q93086 422 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 DHTKD1Q96HY7 919 aaPredicted RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 PAWRQ96IZ0 340 aaKnown RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 BPIFA3Q9BQP9 254 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 NAT10Q9H0A0 1025 aaKnown RBP13.03□□□□□ -0.32
RNF13-208ENST00000467996 KCTD10Q9H3F6 313 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 IFT122Q9HBG6 1241 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 TBX20Q9UMR3 447 aa13.03□□□□□ -0.32
RNF13-208ENST00000467996 TRIM49BA6NDI0 452 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 K7ERI5 159 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 M0QZ92 97 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 PQBP1O60828 265 aaKnown RBP13.02□□□□□ -0.33
RNF13-208ENST00000467996 CAVIN2O95810 425 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 EN2P19622 333 aaPredicted RBP13.02□□□□□ -0.33
RNF13-208ENST00000467996 CCNE1P24864 410 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 ERCC5P28715 1186 aaPredicted RBP13.02□□□□□ -0.33
RNF13-208ENST00000467996 ZNF165P49910 485 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 EFNA5P52803 228 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 PMS1P54277 932 aaKnown RBP13.02□□□□□ -0.33
RNF13-208ENST00000467996 STX17P56962 302 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 MRPS6P82932 125 aaKnown RBP13.02□□□□□ -0.33
RNF13-208ENST00000467996 CDC42EP1Q00587 391 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 MGAT3Q09327 533 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 KNOP1Q1ED39 458 aaKnown RBP13.02□□□□□ -0.33
RNF13-208ENST00000467996 TRIM60Q495X7 471 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 C1orf53Q5VUE5 145 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 NECAB2Q7Z6G3 386 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 MAP4K3Q8IVH8 894 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 ACCSQ96QU6 501 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 MED15Q96RN5 788 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 OSMRQ99650 979 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 IKZF4Q9H2S9 585 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 SEMA6BQ9H3T3 888 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 TMEM206Q9H813 350 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 RWDD2AQ9UIY3 292 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 GINS2Q9Y248 185 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 TRPV2Q9Y5S1 764 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 CDY2AQ9Y6F7 541 aa13.02□□□□□ -0.33
RNF13-208ENST00000467996 DNAH12Q6ZR08 3092 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 INO80B-WBP1J3KQ70 363 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
RNF13-208ENST00000467996 CAND2O75155 1236 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 EDN1P05305 212 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 PRKCBP05771 671 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 CTSHP09668 335 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 THPOP40225 353 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 STRN3Q13033 797 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 MAPK6Q16659 721 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 ZCWPW2Q504Y3 356 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 ANKRD40Q6AI12 368 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 CENPPQ6IPU0 288 aa13.01□□□□□ -0.33
RNF13-208ENST00000467996 TTI2Q6NXR4 508 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms