RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 GUCY2CP25092 1073 aa28.77■■■□□ 2.2
PDCD4-205ENST00000467574 HOXA11P31270 313 aaPredicted RBP28.77■■■□□ 2.2
PDCD4-205ENST00000467574 AMHR2Q16671 573 aa28.77■■■□□ 2.2
PDCD4-205ENST00000467574 KIFAP3Q92845 792 aa28.77■■■□□ 2.2
PDCD4-205ENST00000467574 CHAMP1Q96JM3 812 aa28.77■■■□□ 2.2
PDCD4-205ENST00000467574 PIN4Q9Y237 131 aaKnown RBP28.77■■■□□ 2.2
PDCD4-205ENST00000467574 ADGRA3Q8IWK6 1321 aa28.76■■■□□ 2.19
PDCD4-205ENST00000467574 LRRIQ4A6NIV6 560 aa28.76■■■□□ 2.19
PDCD4-205ENST00000467574 HIP1RO75146 1068 aa28.76■■■□□ 2.19
PDCD4-205ENST00000467574 ZSCAN20P17040 1043 aaPredicted RBP28.76■■■□□ 2.19
PDCD4-205ENST00000467574 RAD54LQ92698 747 aa28.76■■■□□ 2.19
PDCD4-205ENST00000467574 TRAIPQ9BWF2 469 aa28.76■■■□□ 2.19
PDCD4-205ENST00000467574 REV3LO60673 3130 aa28.76■■■□□ 2.19
PDCD4-205ENST00000467574 TSPAN1O60635 241 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 SSBP05455 408 aaKnown RBP eCLIP28.75■■■□□ 2.19
PDCD4-205ENST00000467574 STAG3L1P0CL83 205 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 ATF7P17544 494 aaPredicted RBP28.75■■■□□ 2.19
PDCD4-205ENST00000467574 NAMPTP43490 491 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 GATMP50440 423 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 PCBP1Q15365 356 aaKnown RBP eCLIP28.75■■■□□ 2.19
PDCD4-205ENST00000467574 NAALADL2Q58DX5 795 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 ARSHQ5FYA8 562 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 AXDND1Q5T1B0 1012 aaPredicted RBP28.75■■■□□ 2.19
PDCD4-205ENST00000467574 ECHDC2Q86YB7 292 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 ELAC1Q9H777 363 aaKnown RBP28.75■■■□□ 2.19
PDCD4-205ENST00000467574 RNF19AQ9NV58 838 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 TMEM161AQ9NX61 479 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 DACT1Q9NYF0 836 aa28.75■■■□□ 2.19
PDCD4-205ENST00000467574 A0A087X0B3 334 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 A0A0U1RQF3 1178 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 INO80B-WBP1J3KQ70 363 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 LINC00271P0C7V0 271 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 ZNF598Q86UK7 904 aaKnown RBP28.74■■■□□ 2.19
PDCD4-205ENST00000467574 RASSF8Q8NHQ8 419 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 KCNG4Q8TDN1 519 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 CDX2Q99626 313 aaPredicted RBP28.74■■■□□ 2.19
PDCD4-205ENST00000467574 TIPINQ9BVW5 301 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 KCND2Q9NZV8 630 aa28.74■■■□□ 2.19
PDCD4-205ENST00000467574 EPOPA6NHQ4 379 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 IBSPP21815 317 aaPredicted RBP28.73■■■□□ 2.19
PDCD4-205ENST00000467574 MCM6Q14566 821 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 PPP2R5AQ15172 486 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 LARP4BQ92615 738 aaKnown RBP28.73■■■□□ 2.19
PDCD4-205ENST00000467574 KIFC3Q9BVG8 833 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 CCDC113Q9H0I3 377 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 RCOR1Q9UKL0 485 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 CFAP45Q9UL16 551 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 PCDHB7Q9Y5E2 793 aa28.73■■■□□ 2.19
PDCD4-205ENST00000467574 PRUNE2Q8WUY3 3088 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 CUTAO60888 179 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 ERLIN2O94905 339 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 TXLNAP40222 546 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 ERVK-21P61565 698 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 RAD51AP2Q09MP3 1159 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 UBXN11Q5T124 520 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 TWF2Q6IBS0 349 aaKnown RBP28.72■■■□□ 2.19
PDCD4-205ENST00000467574 PPP4R3CPQ6ZMV5 832 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 GPBP1Q86WP2 473 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 DRC1Q96MC2 740 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 PRDM12Q9H4Q4 367 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 CERS4Q9HA82 394 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 STK17AQ9UEE5 414 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 LRFN2Q9ULH4 789 aa28.72■■■□□ 2.19
PDCD4-205ENST00000467574 NPHP3-ACAD11A0A0J9YXS1 232 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 B4GALT5O43286 388 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 SLC34A2O95436 690 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 FAM187BQ17R55 369 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 SHC4Q6S5L8 630 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 ZBTB8OSQ8IWT0 167 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 CMTR2Q8IYT2 770 aaKnown RBP28.71■■■□□ 2.19
PDCD4-205ENST00000467574 IFT74Q96LB3 600 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 C2orf40Q9H1Z8 148 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 FZD8Q9H461 694 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 FAM105AQ9NUU6 356 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 CCDC39Q9UFE4 941 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 PCDHA7Q9UN72 937 aa28.71■■■□□ 2.19
PDCD4-205ENST00000467574 EDN1P05305 212 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 FGFR1P11362 822 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 ARF4P18085 180 aaPredicted RBP28.7■■■□□ 2.18
PDCD4-205ENST00000467574 AXLP30530 894 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 NPTX2P47972 431 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 DEPTORQ8TB45 409 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 MYLIPQ8WY64 445 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 CPB2Q96IY4 423 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 TGS1Q96RS0 853 aaKnown RBP28.7■■■□□ 2.18
PDCD4-205ENST00000467574 C17orf80Q9BSJ5 609 aa28.7■■■□□ 2.18
PDCD4-205ENST00000467574 RNF216Q9NWF9 866 aaPredicted RBP28.7■■■□□ 2.18
PDCD4-205ENST00000467574 TTLL13PA6NNM8 815 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 PEX3P56589 373 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 CACNB1Q02641 598 aaPredicted RBP28.69■■■□□ 2.18
PDCD4-205ENST00000467574 DHX8Q14562 1220 aaKnown RBP28.69■■■□□ 2.18
PDCD4-205ENST00000467574 RRAGBQ5VZM2 374 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 ARNTL2Q8WYA1 636 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 PRIMPOLQ96LW4 560 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 REEP2Q9BRK0 252 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 C17orf75Q9HAS0 396 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 PRMT7Q9NVM4 692 aaPredicted RBP28.69■■■□□ 2.18
PDCD4-205ENST00000467574 ARHGAP28Q9P2N2 729 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 ATG2AQ2TAZ0 1938 aa28.69■■■□□ 2.18
PDCD4-205ENST00000467574 CNTNAP2Q9UHC6 1331 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms