RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 DUSP28Q4G0W2 176 aa20.52■□□□□ 0.88
CHRNA4-203ENST00000467563 MSL3Q8N5Y2 521 aaKnown RBP20.52■□□□□ 0.88
CHRNA4-203ENST00000467563 TRAPPC12Q8WVT3 735 aa20.52■□□□□ 0.88
CHRNA4-203ENST00000467563 USP6NLQ92738 828 aa20.52■□□□□ 0.88
CHRNA4-203ENST00000467563 RNPEPQ9H4A4 650 aa20.52■□□□□ 0.88
CHRNA4-203ENST00000467563 TRPC6Q9Y210 931 aa20.52■□□□□ 0.88
CHRNA4-203ENST00000467563 ADGRG1Q9Y653 693 aa20.52■□□□□ 0.88
CHRNA4-203ENST00000467563 LRRIQ4A6NIV6 560 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 TMEM88BA6NKF7 163 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 H0YCG3 227 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 CCP110O43303 1012 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 ZSCAN12O43309 604 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 HOXC6P09630 235 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 TRIM49P0CI25 452 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 TRIM49CP0CI26 452 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 SLC9A1P19634 815 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 BFSP1Q12934 665 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 GRM1Q13255 1194 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 PPP2R5AQ15172 486 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 KCNN1Q92952 543 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 EDEM3Q9BZQ6 932 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 ERAP1Q9NZ08 941 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 KCNG1Q9UIX4 513 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 PLAGL2Q9UPG8 496 aa20.52■□□□□ 0.87
CHRNA4-203ENST00000467563 IGKV6-21A0A0C4DH24 114 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 ACTN1P12814 892 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 HNRNPH3P31942 346 aaKnown RBP20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 TM4SF4P48230 202 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 CAPSQ13938 189 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 EXOC3L4Q17RC7 722 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 PRAMEF19Q5SWL8 479 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 RRAGAQ7L523 313 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 PRPF31Q8WWY3 499 aaKnown RBP20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 GANQ9H2C0 597 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 NLRC4Q9NPP4 1024 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 CEP72Q9P209 647 aa20.51■□□□□ 0.87
CHRNA4-203ENST00000467563 GOLGA8IPA6NC78 632 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 LRRC53A6NM62 1247 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 GOLGA8JA6NMD2 632 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 HNRNPDLO14979 420 aaKnown RBP20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 HBP1O60381 514 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 PON1P27169 355 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 POLR2FP61218 127 aaKnown RBP20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 BRDTQ58F21 947 aaPredicted RBP20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 IQSEC1Q6DN90 963 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 LRRC71Q8N4P6 559 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 DEPTORQ8TB45 409 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 SUGCTQ9HAC7 445 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 USP20Q9Y2K6 914 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 ZNF286BP0CG31 522 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 FMO5P49326 533 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 DLG4P78352 724 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 CCL14Q16627 93 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 CBWD6Q4V339 395 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 CBWD3Q5JTY5 395 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 CBWD5Q5RIA9 395 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 PDXDC1Q6P996 788 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 INTS8Q75QN2 995 aaKnown RBP20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 CACNA2D4Q7Z3S7 1137 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 ZBTB10Q96DT7 871 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 SAAL1Q96ER3 474 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 HHIPL1Q96JK4 782 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 ZNHIT6Q9NWK9 470 aaKnown RBP20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 GJD2Q9UKL4 321 aa20.5■□□□□ 0.87
CHRNA4-203ENST00000467563 GTPBP10A4D1E9 387 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 ADRB2P07550 413 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 CCDC175P0C221 793 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 CTGFP29279 349 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 ABCD1P33897 745 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 IER5Q5VY09 327 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 GBP6Q6ZN66 633 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 CBWD2Q8IUF1 395 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 ACRBPQ8NEB7 543 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 PLEKHO2Q8TD55 490 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 BICD1Q96G01 975 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 C16orf70Q9BSU1 422 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 PLCB1Q9NQ66 1216 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 GCNT4Q9P109 453 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 R3HCC1Q9Y3T6 440 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 PCNTO95613 3336 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 A0A0U1RQJ8 604 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 MAPK13O15264 365 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 PPFIA4O75335 1185 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 CYP2B6P20813 491 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 CYP4F22Q6NT55 531 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 ATRIPQ8WXE1 791 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 POMGNT1Q8WZA1 660 aa20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 EPN1Q9Y6I3 576 aaPredicted RBP20.49■□□□□ 0.87
CHRNA4-203ENST00000467563 K7ERI5 159 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 GAS2O43903 313 aaKnown RBP20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 NDUFA10O95299 355 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 KRT13P13646 458 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 CYP2C19P33261 490 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 VAMP7P51809 220 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 CDK17Q00537 523 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 SNRNP35Q16560 246 aaKnown RBP20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 C1orf220Q5T0J3 134 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 KLHDC7AQ5VTJ3 777 aa20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 PAXIP1Q6ZW49 1069 aaPredicted RBP20.48■□□□□ 0.87
CHRNA4-203ENST00000467563 GPIHBP1Q8IV16 184 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms