RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MDGA1Q8NFP4 955 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 CLIP3Q96DZ5 547 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 MRFAP1L1Q96HT8 127 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 RNPC3Q96LT9 517 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 MTFR1LQ9H019 292 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 CFBP00751 764 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 PFKMP08237 780 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 NR4A1P22736 598 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 ZFP36P26651 326 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 FLT3P36888 993 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 LRRC32Q14392 662 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 SEPT7Q16181 437 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 CCDC144BQ3MJ40 725 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 CFAP100Q494V2 611 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 DCAF17Q5H9S7 520 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 MRGPREQ86SM8 312 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 ELOA2Q8IYF1 753 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 UNC5BQ8IZJ1 945 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 CMTM4Q8IZR5 234 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 ZNF512Q96ME7 567 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 FDXACB1Q9BRP7 624 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 GPR87Q9BY21 358 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 ZSWIM4Q9H7M6 989 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 TOMM22Q9NS69 142 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 CD2APQ9Y5K6 639 aa4.51□□□□□ -1.69
GTF3C3-209ENST00000466862 XDHP47989 1333 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 A0A087X1B8 175 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 GPR158Q5T848 1215 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 MFSD5Q6N075 450 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 UBE2R2Q712K3 238 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 ZZZ3Q8IYH5 903 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 ULK2Q8IYT8 1036 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 RPUSD2Q8IZ73 545 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 CHTF18Q8WVB6 975 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 LENG9Q96B70 501 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 PRRX2Q99811 253 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 C11orf21Q9P2W6 132 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 DMRT1Q9Y5R6 373 aa4.5□□□□□ -1.69
GTF3C3-209ENST00000466862 KPNA6O60684 536 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 CD40P25942 277 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 PHC1P78364 1004 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 CNGB1Q14028 1251 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 FAM214AQ32MH5 1076 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 RABL3Q5HYI8 236 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 KRT40Q6A162 431 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 APBB1IPQ7Z5R6 666 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 MRGPRGQ86SM5 289 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 LRRTM3Q86VH5 581 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 NXPE1Q8N323 547 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 MB21D1Q8N884 522 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 SMC1BQ8NDV3 1235 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 MNTQ99583 582 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 NOL10Q9BSC4 688 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 CPEB1Q9BZB8 566 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 USP36Q9P275 1121 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 RCAN3Q9UKA8 241 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 PCDHB6Q9Y5E3 794 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 HS3ST4Q9Y661 456 aa4.49□□□□□ -1.69
GTF3C3-209ENST00000466862 LCHNA4D1U4 455 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 FAM20BO75063 409 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 IPO13O94829 963 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 FSBPO95073 299 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 LY86O95711 162 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 ZNF662Q6ZS27 426 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 CXorf67Q86X51 503 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 SLC41A1Q8IVJ1 513 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 ATXN2LQ8WWM7 1075 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 UBXN4Q92575 508 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 NINJ1Q92982 152 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 PGBD4Q96DM1 585 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 ZNF496Q96IT1 587 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 HIST1H2AHQ96KK5 128 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 HIST1H2AJQ99878 128 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 MLST8Q9BVC4 326 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 THG1LQ9NWX6 298 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 ING3Q9NXR8 418 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 TMPRSS11EQ9UL52 423 aa4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 REXO2Q9Y3B8 237 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-209ENST00000466862 MYPNQ86TC9 1320 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 GRID2IPA4D2P6 1211 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 GOLGA8BA8MQT2 603 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 NRP1O14786 923 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 FOXN1O15353 648 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 GAS7O60861 476 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 PCDH8O95206 1070 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 APOL3O95236 402 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 PROZP22891 400 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 CD69Q07108 199 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 TCEA2Q15560 299 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 MAN2A1Q16706 1144 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 TIGD7Q6NT04 549 aaPredicted RBP4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 LRRC55Q6ZSA7 311 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 LYSMD2Q8IV50 215 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 MSL3Q8N5Y2 521 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 CDYL2Q8N8U2 506 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 OR52N2Q8NGI0 321 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 SLC25A43Q8WUT9 341 aaPredicted RBP4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 ST8SIA2Q92186 375 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 UIMC1Q96RL1 719 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms