RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 Q4G0T1 1027 aa16.73■□□□□ 0.27
ABCF3-206ENST00000466742 CHADLQ6NUI6 762 aa16.73■□□□□ 0.27
ABCF3-206ENST00000466742 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
ABCF3-206ENST00000466742 STK32AQ8WU08 396 aa16.73■□□□□ 0.27
ABCF3-206ENST00000466742 UBLCP1Q8WVY7 318 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-206ENST00000466742 PTPRN2Q92932 1015 aa16.73■□□□□ 0.27
ABCF3-206ENST00000466742 PHACTR1Q9C0D0 580 aa16.73■□□□□ 0.27
ABCF3-206ENST00000466742 SCOCQ9UIL1 159 aa16.73■□□□□ 0.27
ABCF3-206ENST00000466742 TMEM59LQ9UK28 342 aa16.73■□□□□ 0.27
ABCF3-206ENST00000466742 TPBGLP0DKB5 382 aa16.72■□□□□ 0.27
ABCF3-206ENST00000466742 TRIM21P19474 475 aaKnown RBP16.72■□□□□ 0.27
ABCF3-206ENST00000466742 RPL13P26373 211 aaKnown RBP16.72■□□□□ 0.27
ABCF3-206ENST00000466742 SKIV2L2P42285 1042 aaKnown RBP16.72■□□□□ 0.27
ABCF3-206ENST00000466742 FIGNQ5HY92 759 aa16.72■□□□□ 0.27
ABCF3-206ENST00000466742 GPATCH4Q5T3I0 446 aaKnown RBP16.72■□□□□ 0.27
ABCF3-206ENST00000466742 ENDOVQ8N8Q3 282 aaKnown RBP16.72■□□□□ 0.27
ABCF3-206ENST00000466742 DAGLBQ8NCG7 672 aa16.72■□□□□ 0.27
ABCF3-206ENST00000466742 RAB3IPQ96QF0 476 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-206ENST00000466742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.27
ABCF3-206ENST00000466742 CTTNBP2NLQ9P2B4 639 aa16.72■□□□□ 0.27
ABCF3-206ENST00000466742 PCDHA4Q9UN74 947 aa16.72■□□□□ 0.27
ABCF3-206ENST00000466742 SMAPO00193 183 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 CCNB1P14635 433 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 GSTT1P30711 240 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 EIF3BP55884 814 aaKnown RBP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 EARS2Q5JPH6 523 aaKnown RBP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 ZNF658Q5TYW1 1059 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 TYW1BQ6NUM6 668 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 ARHGAP18Q8N392 663 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 ASAP3Q8TDY4 903 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 DNAJC9Q8WXX5 260 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 CYP39A1Q9NYL5 469 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 TBC1D12O60347 775 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 PEX11AO75192 247 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 TRAPPC10P48553 1259 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 SPDYCQ5MJ68 293 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 RBM26Q5T8P6 1007 aaKnown RBP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 TSPAN18Q96SJ8 248 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 TIPINQ9BVW5 301 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 CPVLQ9H3G5 476 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 SALL4Q9UJQ4 1053 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 PNMA2Q9UL42 364 aa16.71■□□□□ 0.27
ABCF3-206ENST00000466742 USP15Q9Y4E8 981 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-206ENST00000466742 hCG_1984214I3L0E3 225 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 TMEM62Q0P6H9 643 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 MPP3Q13368 585 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 TSHZ1Q6ZSZ6 1077 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 HEATR3Q7Z4Q2 680 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 SIAH1Q8IUQ4 282 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 BLIDQ8IZY5 108 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 ZNF713Q8N859 430 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-206ENST00000466742 INPP4AQ96PE3 977 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-206ENST00000466742 NOX5Q96PH1 765 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 ADAM7Q9H2U9 754 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 BIN2Q9UBW5 565 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-206ENST00000466742 SYNPO2Q9UMS6 1093 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-206ENST00000466742 MYH6P13533 1939 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 TRIM75PA6NK02 468 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 F8VZ95 297 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 M0R2N6 131 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 BMP15O95972 392 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 PDE6CP51160 858 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 SHROOM1Q2M3G4 852 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-206ENST00000466742 PARP6Q2NL67 630 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 LONP2Q86WA8 852 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 DYDC1Q8WWB3 177 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 UBA5Q9GZZ9 404 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 EXOC1Q9NV70 894 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 PLAGL2Q9UPG8 496 aa16.7■□□□□ 0.26
ABCF3-206ENST00000466742 FAM205CA6NFA0 338 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 O00370 1275 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 GDF11O95390 407 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 SHBGP04278 402 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 FAM200BP0CF97 657 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 CCDC166P0CW27 439 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 KIF11P52732 1056 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 RRP1BQ14684 758 aaKnown RBP16.69■□□□□ 0.26
ABCF3-206ENST00000466742 USP38Q8NB14 1042 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 RBBP8NLQ8NC74 664 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-206ENST00000466742 CFAP61Q8NHU2 1237 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 DCAF4Q8WV16 495 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 PIGSQ96S52 555 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 ZMYND12Q9H0C1 365 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 NEUROG2Q9H2A3 272 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 CIDEBQ9UHD4 219 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 TMEM221A6NGB7 291 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 GH2P01242 217 aa16.69■□□□□ 0.26
ABCF3-206ENST00000466742 PLEKP08567 350 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-206ENST00000466742 GMPSP49915 693 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-206ENST00000466742 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms