RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SYMPKQ92797 1274 aaKnown RBP10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 CLP1Q92989 425 aaKnown RBP10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 CCDC51Q96ER9 411 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 CALML4Q96GE6 196 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 EPSTI1Q96J88 318 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 CLIC6Q96NY7 704 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 RUSC1Q9BVN2 902 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 C17orf75Q9HAS0 396 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 RNF19AQ9NV58 838 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 TMEM161AQ9NX61 479 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 DACT1Q9NYF0 836 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 DAXXQ9UER7 740 aaPredicted RBP10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 ADGRA3Q8IWK6 1321 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 MYH11P35749 1972 aa10.5□□□□□ -0.73
SDCCAG3-208ENST00000466579 KIAA1671Q9BY89 1806 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 TCHHQ07283 1943 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 TSPAN1O60635 241 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 UPP2O95045 317 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 EOMESO95936 686 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 ATF7P17544 494 aaPredicted RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 PLCG1P19174 1290 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 POU3F3P20264 500 aaPredicted RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 KARSQ15046 597 aaKnown RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 PPP2R5AQ15172 486 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 STK38Q15208 465 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 ARSHQ5FYA8 562 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 AXDND1Q5T1B0 1012 aaPredicted RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 FAM117BQ6P1L5 589 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 CATSPER4Q7RTX7 472 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 ECHDC2Q86YB7 292 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 KCNG4Q8TDN1 519 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 RSPH1Q8WYR4 309 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 RAD54LQ92698 747 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 CDK5RAP3Q96JB5 506 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 PRIMPOLQ96LW4 560 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 SAMD11Q96NU1 681 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 YME1L1Q96TA2 773 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 CDX2Q99626 313 aaPredicted RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 NTPCRQ9BSD7 190 aaKnown RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 CCDC113Q9H0I3 377 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 C2orf40Q9H1Z8 148 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 FZD8Q9H461 694 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 TFIP11Q9UBB9 837 aaKnown RBP10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 RCOR1Q9UKL0 485 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 CFAP45Q9UL16 551 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 STXBP5LQ9Y2K9 1186 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 COL6A3P12111 3177 aa10.49□□□□□ -0.73
SDCCAG3-208ENST00000466579 COL4A4P53420 1690 aaPredicted RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 EPOPA6NHQ4 379 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 C5orf67F2Z3F1 127 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 CUTAO60888 179 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 HIP1RO75146 1068 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 SKIP12755 728 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 RAB27AP51159 221 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 DNM1Q05193 864 aaKnown RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 NAALADL2Q58DX5 795 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 SPECC1Q5M775 1068 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 UBXN11Q5T124 520 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 MAEAQ7L5Y9 396 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 MRPL10Q7Z7H8 261 aaKnown RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 DRC1Q96MC2 740 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 TGS1Q96RS0 853 aaKnown RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 PRMT7Q9NVM4 692 aaPredicted RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 ARHGAP28Q9P2N2 729 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 PIN4Q9Y237 131 aaKnown RBP10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 PCDHB7Q9Y5E2 793 aa10.48□□□□□ -0.73
SDCCAG3-208ENST00000466579 A0A087X0B3 334 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 A0A1B0GUA9 196 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 LRRIQ4A6NIV6 560 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 INO80B-WBP1J3KQ70 363 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 ACKR2O00590 384 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 HOXA2O43364 376 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 LPXNO60711 386 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 ARF4P18085 180 aaPredicted RBP10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 NPTX2P47972 431 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZNF131P52739 623 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 EFNA5P52803 228 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 ADGRE1Q14246 886 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZRSR1Q15695 479 aaKnown RBP10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 SPRED2Q7Z698 418 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZBTB8OSQ8IWT0 167 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 FIBCD1Q8N539 461 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 LARP4BQ92615 738 aaKnown RBP10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 IFT74Q96LB3 600 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 CASD1Q96PB1 797 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 PLIN2Q99541 437 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 TMEM117Q9H0C3 514 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 PRDM12Q9H4Q4 367 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 FAM105AQ9NUU6 356 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 CCDC39Q9UFE4 941 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 KCNG1Q9UIX4 513 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms